Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3461

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,149,770	+		Shewana3_3460	0.79	-0.1
4,149,800	-		Shewana3_3460	0.79	-0.3
4,149,979	-		Shewana3_3460	0.85	-2.8
4,149,981	+		Shewana3_3460	0.85	-0.2
4,150,079	-		Shewana3_3460	0.87	+0.1
4,150,129	-		Shewana3_3460	0.89	-2.8
4,150,280	+				-1.5
4,150,376	-				-0.4
4,150,390	-				-1.1
4,150,425	+				-1.6
4,150,434	-				-0.6
4,150,749	-				+0.2
4,150,942	-		Shewana3_3461	0.23	+0.2
4,150,944	-		Shewana3_3461	0.23	-0.8
4,150,994	+		Shewana3_3461	0.28	-1.3
4,151,077	-		Shewana3_3461	0.35	-0.4
4,151,094	+		Shewana3_3461	0.36	-0.6
4,151,094	+		Shewana3_3461	0.36	-1.6
4,151,196	-		Shewana3_3461	0.45	-1.9
4,151,234	-		Shewana3_3461	0.48	-0.1
4,151,457	+		Shewana3_3461	0.67	-0.4
4,151,457	+		Shewana3_3461	0.67	+0.2
4,151,458	-		Shewana3_3461	0.67	+0.0
4,151,989	+		Shewana3_3462	0.14	+0.2
4,151,997	-		Shewana3_3462	0.15	+0.8
4,151,997	-		Shewana3_3462	0.15	-0.2
4,151,997	-		Shewana3_3462	0.15	-0.9
4,151,999	+		Shewana3_3462	0.15	+0.4
4,151,999	+		Shewana3_3462	0.15	-0.6
4,151,999	+		Shewana3_3462	0.15	-0.6
4,152,077	+		Shewana3_3462	0.23	-0.4
4,152,229	-		Shewana3_3462	0.38	+0.5
4,152,271	-		Shewana3_3462	0.43	-0.7
4,152,323	+		Shewana3_3462	0.48	-0.3
4,152,379	-		Shewana3_3462	0.54	-0.4
4,152,455	-		Shewana3_3462	0.61	-0.3
4,152,485	-		Shewana3_3462	0.64	+1.1
4,152,485	-		Shewana3_3462	0.64	-1.1
4,152,698	+		Shewana3_3462	0.86	+0.3
4,152,737	+		Shewana3_3462	0.90	-0.1
4,152,745	-				-0.1
4,152,844	-				-0.5