Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3378

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,047,490	+		Shewana3_3377	0.18	-0.2
4,047,530	+		Shewana3_3377	0.22	-1.2
4,047,604	-		Shewana3_3377	0.28	+0.0
4,047,658	-		Shewana3_3377	0.32	+0.2
4,047,760	-		Shewana3_3377	0.40	-0.5
4,047,969	-		Shewana3_3377	0.58	+0.8
4,048,015	-		Shewana3_3377	0.61	+0.5
4,048,088	+		Shewana3_3377	0.67	+0.2
4,048,088	+		Shewana3_3377	0.67	-0.2
4,048,170	-		Shewana3_3377	0.74	-0.3
4,048,188	-		Shewana3_3377	0.76	-0.8
4,048,199	+		Shewana3_3377	0.77	-1.7
4,048,322	-		Shewana3_3377	0.87	-0.1
4,048,378	+				-0.2
4,048,502	+				-0.5
4,048,502	+				-1.4
4,048,502	+				+0.4
4,048,502	+				-1.7
4,048,510	-				-0.4
4,048,510	-				-0.7
4,048,510	-				-0.0
4,048,563	-				+0.3
4,048,597	+				-0.2
4,048,610	-				+0.4
4,048,719	+		Shewana3_3378	0.17	-0.8
4,048,752	-		Shewana3_3378	0.20	-0.8
4,048,840	+		Shewana3_3378	0.26	-0.5
4,048,979	+		Shewana3_3378	0.36	-0.6
4,048,982	-		Shewana3_3378	0.36	+0.1
4,048,984	+		Shewana3_3378	0.37	-0.4
4,048,987	-		Shewana3_3378	0.37	+2.0
4,048,987	-		Shewana3_3378	0.37	+0.4
4,049,053	+		Shewana3_3378	0.42	-1.8
4,049,061	-		Shewana3_3378	0.42	-2.6
4,049,061	-		Shewana3_3378	0.42	+0.0
4,049,126	+		Shewana3_3378	0.47	-0.8
4,049,141	-		Shewana3_3378	0.48	+0.3
4,049,145	+		Shewana3_3378	0.48	-0.9
4,049,153	-		Shewana3_3378	0.49	-0.0
4,049,229	+		Shewana3_3378	0.54	-0.5
4,049,266	-		Shewana3_3378	0.57	-0.0
4,049,283	+		Shewana3_3378	0.58	-1.2
4,049,291	-		Shewana3_3378	0.59	+0.5
4,049,342	+		Shewana3_3378	0.63	+0.3
4,049,455	+		Shewana3_3378	0.71	-0.6
4,049,463	-		Shewana3_3378	0.72	+0.0
4,049,611	+		Shewana3_3378	0.82	-2.7
4,050,011	-				+0.5
4,050,163	+				-0.7
4,050,257	-				-0.8
4,050,273	+				-0.0
4,050,420	+				-1.5
4,050,425	+		Shewana3_3379	0.10	+0.1
4,050,428	-		Shewana3_3379	0.11	-1.0
4,050,470	+		Shewana3_3379	0.15	+2.0
4,050,470	+		Shewana3_3379	0.15	-0.8
4,050,478	-		Shewana3_3379	0.15	-0.3
4,050,478	-		Shewana3_3379	0.15	-0.1
4,050,539	+		Shewana3_3379	0.21	+0.0
4,050,698	+		Shewana3_3379	0.37	-0.3
4,050,715	-		Shewana3_3379	0.38	-0.8