Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3308

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
3,968,899	+		Shewana3_3306	0.49	-0.7
3,968,899	+		Shewana3_3306	0.49	-1.2
3,968,907	-		Shewana3_3306	0.51	-0.8
3,969,039	+		Shewana3_3306	0.82	-0.2
3,969,059	+		Shewana3_3306	0.87	-3.0
3,969,135	-				+1.0
3,969,184	+		Shewana3_3307	0.10	-0.8
3,969,413	-		Shewana3_3307	0.42	-0.9
3,969,558	+		Shewana3_3307	0.62	-0.4
3,969,566	-		Shewana3_3307	0.63	-1.8
3,969,710	-		Shewana3_3307	0.83	-0.1
3,969,769	-				+2.0
3,969,834	-				+1.0
3,970,091	+		Shewana3_3308	0.21	-1.1
3,970,096	-		Shewana3_3308	0.21	-0.1
3,970,096	-		Shewana3_3308	0.21	-0.8
3,970,122	+		Shewana3_3308	0.23	-1.1
3,970,184	-		Shewana3_3308	0.28	-0.8
3,970,361	-		Shewana3_3308	0.43	-1.5
3,970,378	-		Shewana3_3308	0.44	+0.1
3,970,449	-		Shewana3_3308	0.50	-3.2
3,970,679	-		Shewana3_3308	0.68	-0.2
3,970,902	-		Shewana3_3308	0.87	-0.1
3,970,930	-		Shewana3_3308	0.89	+0.4
3,970,993	+				-0.5
3,971,108	-				-0.5
3,971,153	-				+2.1
3,971,275	-	rumB	Shewana3_3309	0.17	-1.0
3,971,407	-	rumB	Shewana3_3309	0.28	+0.5
3,971,466	+	rumB	Shewana3_3309	0.33	-0.6
3,971,535	+	rumB	Shewana3_3309	0.39	-1.4
3,971,857	+	rumB	Shewana3_3309	0.67	-2.4
3,971,865	-	rumB	Shewana3_3309	0.68	-0.4
3,971,865	-	rumB	Shewana3_3309	0.68	-0.1
3,971,865	-	rumB	Shewana3_3309	0.68	+0.2
3,971,875	+	rumB	Shewana3_3309	0.69	-0.6
3,971,997	+	rumB	Shewana3_3309	0.79	-0.6
3,972,017	-	rumB	Shewana3_3309	0.81	-0.2