Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3174

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
3,814,082	+		Shewana3_3173	0.50	-0.7
3,814,240	+		Shewana3_3173	0.60	+2.5
3,814,250	-		Shewana3_3173	0.60	-0.1
3,814,473	+		Shewana3_3173	0.74	-0.7
3,814,475	-		Shewana3_3173	0.74	+1.5
3,814,480	+		Shewana3_3173	0.75	-0.2
3,814,488	-		Shewana3_3173	0.75	-0.2
3,814,507	+		Shewana3_3173	0.76	+0.1
3,814,543	+		Shewana3_3173	0.78	+0.1
3,814,572	-		Shewana3_3173	0.80	-0.5
3,814,604	+		Shewana3_3173	0.82	-1.7
3,814,749	-				-0.3
3,814,887	-				-0.4
3,815,114	-				+0.1
3,815,229	+		Shewana3_3174	0.14	-0.7
3,815,229	+		Shewana3_3174	0.14	-0.3
3,815,229	+		Shewana3_3174	0.14	+0.1
3,815,229	+		Shewana3_3174	0.14	-1.7
3,815,239	+		Shewana3_3174	0.15	-0.7
3,815,287	+		Shewana3_3174	0.19	-2.2
3,815,518	-		Shewana3_3174	0.38	-0.6
3,815,518	-		Shewana3_3174	0.38	-1.1
3,815,648	+		Shewana3_3174	0.49	-0.3
3,815,712	-		Shewana3_3174	0.55	-1.0
3,815,738	-		Shewana3_3174	0.57	-0.5
3,815,791	+		Shewana3_3174	0.61	-0.9
3,815,932	+		Shewana3_3174	0.73	+0.4
3,815,972	+		Shewana3_3174	0.76	+0.1
3,815,980	-		Shewana3_3174	0.77	+0.5
3,816,023	+		Shewana3_3174	0.81	-0.3
3,816,028	+		Shewana3_3174	0.81	+0.2
3,816,158	+				-0.2
3,816,247	+				-0.5
3,816,247	+				-0.0
3,816,307	+				-0.8
3,816,418	+				+2.0
3,816,420	-				+0.1
3,816,426	-		Shewana3_3175	0.10	-0.1
3,816,790	+		Shewana3_3175	0.61	+0.2
3,816,801	-		Shewana3_3175	0.62	-0.4
3,816,819	+		Shewana3_3175	0.65	+0.7
3,816,834	-		Shewana3_3175	0.67	-0.1
3,816,861	+		Shewana3_3175	0.70	-0.1
3,816,869	-		Shewana3_3175	0.71	-0.7
3,817,011	+				-0.8
3,817,077	+				+0.5
3,817,161	-		Shewana3_3176	0.11	-0.5