Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3099

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
3,717,133	-		Shewana3_3098	0.28	+0.8
3,717,342	+		Shewana3_3098	0.43	-0.2
3,717,342	+		Shewana3_3098	0.43	+0.4
3,717,423	+		Shewana3_3098	0.49	-2.0
3,717,450	-		Shewana3_3098	0.51	-0.7
3,717,450	-		Shewana3_3098	0.51	-1.0
3,717,517	-		Shewana3_3098	0.56	+0.3
3,717,631	+		Shewana3_3098	0.65	+0.9
3,717,648	-		Shewana3_3098	0.66	+0.2
3,717,667	-		Shewana3_3098	0.67	+0.3
3,717,682	-		Shewana3_3098	0.68	-0.3
3,717,683	-		Shewana3_3098	0.68	+0.8
3,717,772	+		Shewana3_3098	0.75	-0.5
3,717,842	+		Shewana3_3098	0.80	+0.4
3,718,219	-		Shewana3_3099	0.14	+0.1
3,718,256	+		Shewana3_3099	0.19	+0.0
3,718,261	+		Shewana3_3099	0.20	-0.3
3,718,302	+		Shewana3_3099	0.25	+1.3
3,718,335	+		Shewana3_3099	0.29	-0.4
3,718,338	-		Shewana3_3099	0.30	-0.2
3,718,343	-		Shewana3_3099	0.30	+6.9
3,718,343	-		Shewana3_3099	0.30	-0.1
3,718,343	-		Shewana3_3099	0.30	+0.7
3,718,358	+		Shewana3_3099	0.32	-0.9
3,718,400	+		Shewana3_3099	0.38	+1.0
3,718,469	-		Shewana3_3099	0.47	+0.3
3,718,624	+		Shewana3_3099	0.67	-1.5
3,718,777	-		Shewana3_3099	0.87	-0.4
3,718,873	+				+2.0
3,719,017	+				-0.6
3,719,121	-				-1.4
3,719,230	-				+0.1
3,719,232	+				+1.0
3,719,232	+				-0.3
3,719,232	+				+2.0
3,719,240	-				-1.6
3,719,240	-				-1.2
3,719,240	-				-0.2
3,719,240	-				-0.9
3,719,240	-				-0.3
3,719,250	-				-0.4
3,719,293	+				+2.0
3,719,299	-				+0.5
3,719,364	-		Shewana3_3100	0.14	+0.8
3,719,453	-		Shewana3_3100	0.28	+0.5
3,719,583	-		Shewana3_3100	0.49	+0.8
3,719,614	-		Shewana3_3100	0.54	-0.2
3,719,800	+		Shewana3_3100	0.83	-0.6
3,719,808	-		Shewana3_3100	0.85	+0.0