Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2740
Experiment: Rifampicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,270,865 | + | -1.3 | |||
3,271,310 | + | Shewana3_2739 | 0.46 | +0.6 | |
3,271,318 | - | Shewana3_2739 | 0.48 | +0.6 | |
3,271,318 | - | Shewana3_2739 | 0.48 | -0.2 | |
3,271,441 | - | Shewana3_2739 | 0.69 | +0.5 | |
3,271,629 | - | -0.4 | |||
3,271,638 | - | +1.2 | |||
3,271,667 | + | -0.1 | |||
3,271,667 | + | +1.2 | |||
3,272,305 | + | -0.3 | |||
3,272,332 | + | -0.4 | |||
3,272,369 | - | +0.1 | |||
3,272,411 | - | +0.2 | |||
3,272,444 | + | +0.6 | |||
3,272,452 | - | +0.0 | |||
3,272,543 | + | Shewana3_2741 | 0.16 | -0.8 | |
3,272,551 | - | Shewana3_2741 | 0.18 | -0.6 | |
3,272,931 | - | Shewana3_2741 | 0.81 | -3.0 | |
3,272,968 | + | Shewana3_2741 | 0.87 | -1.3 |
Or see this region's nucleotide sequence