Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2727

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
3,257,712	-		Shewana3_2726	0.31	+2.2
3,257,739	+		Shewana3_2726	0.33	-0.4
3,257,740	+		Shewana3_2726	0.33	-1.5
3,257,741	-		Shewana3_2726	0.33	+2.2
3,257,756	+		Shewana3_2726	0.34	-0.7
3,257,782	+		Shewana3_2726	0.36	-0.9
3,257,790	-		Shewana3_2726	0.36	+2.2
3,257,790	-		Shewana3_2726	0.36	-0.8
3,257,888	+		Shewana3_2726	0.43	+0.6
3,257,895	+		Shewana3_2726	0.44	-1.6
3,257,909	-		Shewana3_2726	0.45	-0.8
3,257,930	+		Shewana3_2726	0.46	+0.6
3,257,984	+		Shewana3_2726	0.50	+2.2
3,257,996	+		Shewana3_2726	0.51	+0.6
3,258,014	-		Shewana3_2726	0.52	+1.0
3,258,014	-		Shewana3_2726	0.52	+0.2
3,258,021	-		Shewana3_2726	0.53	+1.2
3,258,047	+		Shewana3_2726	0.55	-0.1
3,258,072	-		Shewana3_2726	0.57	+1.2
3,258,082	+		Shewana3_2726	0.57	-1.4
3,258,176	+		Shewana3_2726	0.64	+0.2
3,258,177	+		Shewana3_2726	0.64	+1.2
3,258,178	+		Shewana3_2726	0.64	+1.6
3,258,178	+		Shewana3_2726	0.64	+0.2
3,258,178	+		Shewana3_2726	0.64	+2.2
3,258,178	+		Shewana3_2726	0.64	+0.2
3,258,178	+		Shewana3_2726	0.64	-0.9
3,258,178	+		Shewana3_2726	0.64	-0.1
3,258,178	+		Shewana3_2726	0.64	+0.6
3,258,178	+		Shewana3_2726	0.64	-0.4
3,258,178	+		Shewana3_2726	0.64	-1.4
3,258,178	+		Shewana3_2726	0.64	+0.4
3,258,178	+		Shewana3_2726	0.64	+0.6
3,258,186	-		Shewana3_2726	0.65	+0.6
3,258,186	-		Shewana3_2726	0.65	-0.8
3,258,186	-		Shewana3_2726	0.65	-0.6
3,258,186	-		Shewana3_2726	0.65	+0.6
3,258,186	-		Shewana3_2726	0.65	-1.4
3,258,186	-				+3.2
3,258,186	-		Shewana3_2726	0.65	-1.9
3,258,211	+		Shewana3_2726	0.67	-2.6
3,258,243	+		Shewana3_2726	0.69	-1.0
3,258,287	+		Shewana3_2726	0.72	-1.2
3,258,333	-		Shewana3_2726	0.75	+1.2
3,258,346	+		Shewana3_2726	0.76	-0.9
3,258,354	-		Shewana3_2726	0.77	+2.2
3,258,354	-		Shewana3_2726	0.77	-0.4
3,258,375	+		Shewana3_2726	0.78	+0.6
3,258,399	-		Shewana3_2726	0.80	+0.6
3,258,415	-		Shewana3_2726	0.81	+0.4
3,258,437	+		Shewana3_2726	0.83	+1.2
3,258,512	-		Shewana3_2726	0.88	+0.6
3,258,521	+		Shewana3_2726	0.89	+2.2
3,258,536	-		Shewana3_2726	0.90	+1.2
3,258,556	-				-0.1
3,258,593	+				+1.2
3,258,620	+				-0.8
3,258,621	+				+0.4
3,258,630	+				-1.5
3,258,630	+				+0.2
3,258,638	-				-0.1
3,258,638	-				+0.2
3,258,640	+				-1.0
3,258,640	+				+2.2
3,258,640	+				-1.6
3,258,647	+				-0.9
3,258,647	+				-0.8
3,258,653	-				-0.1
3,258,655	-				+0.2
3,258,667	+				-0.4
3,258,676	-				-0.4
3,258,678	+				-1.2
3,258,755	+		Shewana3_2727	0.13	-0.9
3,258,851	+		Shewana3_2727	0.41	-0.8
3,258,875	-		Shewana3_2727	0.48	+2.2
3,258,908	+		Shewana3_2727	0.58	-1.2
3,258,962	-		Shewana3_2727	0.73	-1.7
3,258,985	-		Shewana3_2727	0.80	+0.4
3,259,016	-		Shewana3_2727	0.89	+0.6
3,259,047	+				+0.2
3,259,047	+				-0.8
3,259,047	+				+0.2
3,259,133	+				+0.2
3,259,133	+				-0.4
3,259,150	+				+0.4
3,259,190	+		Shewana3_2728	0.10	-0.8
3,259,190	+		Shewana3_2728	0.10	+0.4
3,259,190	+		Shewana3_2728	0.10	+0.5
3,259,200	+		Shewana3_2728	0.13	-1.1
3,259,219	-		Shewana3_2728	0.17	+2.2
3,259,219	-		Shewana3_2728	0.17	-0.6
3,259,247	+		Shewana3_2728	0.23	-0.8
3,259,247	+		Shewana3_2728	0.23	-0.8
3,259,255	-		Shewana3_2728	0.25	+0.6
3,259,275	-		Shewana3_2728	0.29	-1.5
3,259,275	-		Shewana3_2728	0.29	+2.2
3,259,391	+		Shewana3_2728	0.55	+2.2
3,259,405	+		Shewana3_2728	0.58	-0.6
3,259,412	-		Shewana3_2728	0.60	-0.1
3,259,428	-		Shewana3_2728	0.63	+7.3
3,259,448	+		Shewana3_2728	0.68	-1.5
3,259,456	-		Shewana3_2728	0.70	-0.4
3,259,460	+		Shewana3_2728	0.70	-0.4
3,259,460	+		Shewana3_2728	0.70	-0.4
3,259,468	-		Shewana3_2728	0.72	+1.2
3,259,579	+				-1.0
3,259,579	+				+0.2
3,259,619	-				+0.2
3,259,644	+				+0.2
3,259,835	-		Shewana3_2729	0.38	-0.7
3,259,925	+		Shewana3_2729	0.53	+1.2
3,259,971	-		Shewana3_2729	0.60	-0.2
3,260,026	-		Shewana3_2729	0.69	-0.8