Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2535
Experiment: Rifampicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,031,033 | - | +1.6 | |||
3,031,056 | - | Shewana3_2535 | 0.13 | -0.3 | |
3,031,056 | - | Shewana3_2535 | 0.13 | -0.5 | |
3,031,078 | - | Shewana3_2535 | 0.18 | -2.0 | |
3,031,291 | - | Shewana3_2535 | 0.71 | +0.6 | |
3,031,306 | + | Shewana3_2535 | 0.75 | +0.2 | |
3,031,360 | - | Shewana3_2535 | 0.88 | +0.6 | |
3,031,378 | - | -0.2 | |||
3,031,644 | - | +0.4 | |||
3,031,689 | + | +1.1 | |||
3,031,895 | + | Shewana3_2536 | 0.15 | -1.4 | |
3,031,995 | - | Shewana3_2536 | 0.19 | +0.5 | |
3,032,028 | + | Shewana3_2536 | 0.21 | -1.9 | |
3,032,053 | + | Shewana3_2536 | 0.22 | -1.1 | |
3,032,302 | - | Shewana3_2536 | 0.33 | +0.1 |
Or see this region's nucleotide sequence