Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2491

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,979,693	-				-1.3
2,979,737	-				-1.1
2,979,785	+				+2.2
2,979,788	+				+2.2
2,979,930	-		Shewana3_2490	0.46	+0.9
2,980,086	-				-0.1
2,980,379	-				+0.3
2,980,584	-				+0.5
2,980,599	+				+0.3
2,980,599	+				-0.1
2,980,599	+				-0.6
2,980,695	-				-0.2
2,980,764	+				+0.1
2,980,774	+				-0.2
2,980,782	-				-0.2
2,980,858	+		Shewana3_2491	0.11	-1.1
2,980,858	+		Shewana3_2491	0.11	-0.1
2,980,907	-		Shewana3_2491	0.14	+2.2
2,981,013	+		Shewana3_2491	0.21	+1.1
2,981,140	+		Shewana3_2491	0.29	-0.7
2,981,236	+		Shewana3_2491	0.35	+0.6
2,981,236	+		Shewana3_2491	0.35	-1.1
2,981,244	-		Shewana3_2491	0.35	+0.6
2,981,244	-		Shewana3_2491	0.35	+0.8
2,981,244	-		Shewana3_2491	0.35	-0.9
2,981,280	-		Shewana3_2491	0.38	-1.9
2,981,420	+		Shewana3_2491	0.46	+1.2
2,981,800	-		Shewana3_2491	0.70	+1.2
2,981,816	+		Shewana3_2491	0.71	-0.7
2,981,824	-		Shewana3_2491	0.72	-0.4
2,982,040	+		Shewana3_2491	0.85	+0.5
2,982,224	-				-1.1
2,982,339	+				+0.2
2,982,347	-				+0.1
2,982,491	+				+0.6
2,982,551	-				+1.8
2,982,623	-				+0.2
2,982,800	+		Shewana3_2492	0.11	-0.3
2,982,800	+		Shewana3_2492	0.11	+0.9
2,982,996	-		Shewana3_2492	0.20	-0.4
2,983,115	+		Shewana3_2492	0.25	+0.2
2,983,116	-		Shewana3_2492	0.25	-0.3
2,983,123	-		Shewana3_2492	0.26	-0.0
2,983,158	-		Shewana3_2492	0.27	-1.0
2,983,182	-		Shewana3_2492	0.28	-0.6
2,983,201	-		Shewana3_2492	0.29	-0.1