Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1990

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,368,825	+				+1.4
2,369,054	-				+0.1
2,369,360	+				-0.7
2,369,429	+	ampC	Shewana3_1990	0.13	+0.6
2,369,430	+	ampC	Shewana3_1990	0.13	+0.7
2,369,547	+	ampC	Shewana3_1990	0.22	-0.6
2,369,791	+	ampC	Shewana3_1990	0.42	+0.1
2,369,831	-	ampC	Shewana3_1990	0.46	+0.8
2,369,854	-	ampC	Shewana3_1990	0.47	+1.4
2,369,893	+	ampC	Shewana3_1990	0.51	+1.0
2,369,986	+	ampC	Shewana3_1990	0.58	+0.3
2,370,024	+	ampC	Shewana3_1990	0.61	+1.1
2,370,078	-	ampC	Shewana3_1990	0.66	+1.4
2,370,150	-	ampC	Shewana3_1990	0.72	-0.6
2,370,210	-	ampC	Shewana3_1990	0.77	-0.4
2,370,402	+				-1.0
2,370,945	+				-0.4