Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1918

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,278,360	+		Shewana3_1917	0.68	+0.7
2,278,452	-		Shewana3_1917	0.71	-0.5
2,278,699	+		Shewana3_1917	0.79	-0.3
2,278,770	+		Shewana3_1917	0.82	+0.3
2,278,825	+		Shewana3_1917	0.83	-0.5
2,279,266	-				+0.9
2,279,287	-				-0.3
2,279,376	+				+0.1
2,279,455	-				+2.9
2,279,483	+				+0.9
2,279,484	+				+1.4
2,279,540	+		Shewana3_1918	0.13	-1.2
2,279,727	-		Shewana3_1918	0.26	+1.5
2,279,782	+		Shewana3_1918	0.30	-0.2
2,279,788	+		Shewana3_1918	0.30	+0.1
2,279,866	-		Shewana3_1918	0.35	+0.5
2,279,900	-		Shewana3_1918	0.38	+1.5
2,280,000	+		Shewana3_1918	0.44	-0.5
2,280,027	-		Shewana3_1918	0.46	-0.5
2,280,041	-		Shewana3_1918	0.47	-0.8
2,280,242	-		Shewana3_1918	0.61	+2.5
2,280,264	-		Shewana3_1918	0.62	+0.4
2,280,726	+				+0.2
2,280,793	-				+2.5
2,280,903	-				+1.5
2,280,914	+				+0.3
2,280,946	+				+0.5
2,280,978	+				-0.1
2,280,978	+				-1.1
2,281,133	-		Shewana3_1919	0.15	+1.5
2,281,136	+		Shewana3_1919	0.16	+0.5
2,281,328	-		Shewana3_1919	0.31	+0.9
2,281,702	-		Shewana3_1919	0.60	+0.5
2,281,805	-		Shewana3_1919	0.68	+0.5