Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1831

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,169,630	+				+0.2
2,169,630	+				+0.2
2,169,651	+				-0.1
2,169,701	+				-0.8
2,170,024	-		Shewana3_1830	0.68	-1.3
2,170,180	+				+2.5
2,170,381	+				+2.5
2,170,382	+				+2.5
2,170,400	-				+1.5
2,170,551	-				+2.5
2,170,741	+				-0.3
2,170,899	-		Shewana3_1831	0.21	-1.4
2,170,899	-		Shewana3_1831	0.21	-0.8
2,171,220	+		Shewana3_1831	0.46	+0.9
2,171,305	-		Shewana3_1831	0.53	+0.5
2,171,305	-		Shewana3_1831	0.53	+0.9
2,171,320	-		Shewana3_1831	0.54	+0.2
2,171,320	-		Shewana3_1831	0.54	+2.5
2,171,334	+		Shewana3_1831	0.55	-0.6
2,171,337	-		Shewana3_1831	0.55	+0.9
2,171,486	+		Shewana3_1831	0.67	-0.5
2,171,486	+		Shewana3_1831	0.67	+1.5
2,171,504	-		Shewana3_1831	0.68	-1.7
2,171,739	-		Shewana3_1831	0.86	+0.5
2,171,739	-		Shewana3_1831	0.86	+0.2
2,171,908	+				-1.3
2,171,916	-				-0.6
2,171,955	+				+2.5
2,172,009	+				-0.1
2,172,049	+				-1.6
2,172,146	+				+2.1
2,172,224	-				+0.9
2,172,283	+				+0.0
2,172,336	+				+0.5
2,172,348	-				-1.8
2,172,383	+				+0.9
2,172,401	+				-0.3
2,172,401	+				+0.4
2,172,409	-				+1.5
2,172,508	+				-0.1
2,172,508	+				+0.2
2,172,516	-				+1.9
2,172,574	+				-0.9
2,172,587	-				+2.5
2,172,760	+				-0.8