Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1786

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,109,278	+		Shewana3_1785	0.81	+0.6
2,109,766	+				+0.5
2,109,773	+				+0.6
2,109,855	+				-0.5
2,109,865	+				+1.4
2,109,917	+				+0.9
2,109,917	+				-0.1
2,110,117	+				+0.3
2,110,457	+		Shewana3_1786	0.21	+0.5
2,110,502	+		Shewana3_1786	0.26	+0.5
2,110,651	-				+1.5
2,110,841	+		Shewana3_1786	0.59	+0.5
2,111,004	-		Shewana3_1786	0.75	-0.1
2,111,005	-		Shewana3_1786	0.75	+3.5
2,111,032	+		Shewana3_1786	0.78	+0.2
2,111,032	+		Shewana3_1786	0.78	+0.1
2,111,034	+		Shewana3_1786	0.78	+0.1
2,111,034	+		Shewana3_1786	0.78	-0.1
2,111,040	-		Shewana3_1786	0.78	+0.9
2,111,042	-		Shewana3_1786	0.79	+0.1
2,111,046	+		Shewana3_1786	0.79	+0.5
2,111,046	+		Shewana3_1786	0.79	-0.9
2,111,046	+		Shewana3_1786	0.79	-0.4
2,111,046	+		Shewana3_1786	0.79	-0.4
2,111,046	+		Shewana3_1786	0.79	-2.4
2,111,054	-				+0.9
2,111,054	-		Shewana3_1786	0.80	+1.5
2,111,190	-				+0.9
2,111,190	-				+1.9
2,111,364	-				-0.3
2,111,670	+		Shewana3_1787	0.37	-0.1
2,111,671	+		Shewana3_1787	0.37	+1.5
2,111,671	+		Shewana3_1787	0.37	+2.5
2,111,671	+		Shewana3_1787	0.37	+2.5
2,111,671	+		Shewana3_1787	0.37	+0.9
2,111,671	+		Shewana3_1787	0.37	+1.5
2,111,671	+		Shewana3_1787	0.37	-0.3
2,111,678	-		Shewana3_1787	0.39	+2.5
2,111,678	-		Shewana3_1787	0.39	+1.5
2,111,679	-		Shewana3_1787	0.39	+0.2
2,111,679	-		Shewana3_1787	0.39	+2.5
2,111,679	-		Shewana3_1787	0.39	+1.5
2,111,679	-		Shewana3_1787	0.39	+0.2
2,111,679	-		Shewana3_1787	0.39	+2.5
2,111,689	-		Shewana3_1787	0.41	+0.5
2,111,828	+		Shewana3_1787	0.67	+0.2
2,111,838	+		Shewana3_1787	0.69	-1.5
2,111,843	+		Shewana3_1787	0.69	-0.7
2,111,843	+		Shewana3_1787	0.69	-0.1
2,111,843	+		Shewana3_1787	0.69	-0.4
2,111,843	+		Shewana3_1787	0.69	-1.8
2,111,851	-		Shewana3_1787	0.71	+2.5
2,111,851	-		Shewana3_1787	0.71	+0.5
2,111,941	+		Shewana3_1787	0.88	+1.0
2,111,941	+		Shewana3_1787	0.88	-0.4
2,111,942	+		Shewana3_1787	0.88	+0.8
2,111,942	+		Shewana3_1787	0.88	-0.4
2,111,942	+		Shewana3_1787	0.88	-0.2
2,111,949	-		Shewana3_1787	0.89	+1.5
2,111,962	+				-0.2
2,111,977	+				+0.6
2,111,977	+				-0.3
2,111,978	-				+0.9
2,111,979	+				+0.4
2,111,979	-				+2.5
2,111,979	-				+1.5
2,111,984	+				-0.1
2,111,985	-				+2.5
2,112,012	+				-1.4
2,112,021	+				+2.5
2,112,022	+				+1.5
2,112,024	-				+2.5
2,112,024	-				+0.9
2,112,024	-				+0.2
2,112,091	+				+1.5
2,112,099	-				+0.9
2,112,110	+				+0.5
2,112,154	+				+0.3
2,112,171	+				+0.5
2,112,237	+				+0.9
2,112,256	-				-0.7