Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1781

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,097,263	+				+0.5
2,097,263	+				+2.8
2,097,432	+				+2.5
2,097,450	+				+1.5
2,097,458	-				-0.5
2,097,569	-				+2.5
2,098,273	+				-1.8
2,098,377	-				+2.5
2,098,431	+				+0.5
2,099,144	+		Shewana3_1781	0.44	+0.9
2,099,247	-		Shewana3_1781	0.50	+1.5
2,099,322	-		Shewana3_1781	0.53	-0.5
2,099,753	-		Shewana3_1781	0.74	-0.4
2,099,781	+		Shewana3_1781	0.76	-1.5
2,100,098	-				+0.3
2,100,127	+				+0.7
2,100,210	+				+1.1
2,100,333	+				-0.5
2,100,436	+		Shewana3_1782	0.11	-0.1
2,100,696	-		Shewana3_1782	0.30	+1.6
2,100,721	+		Shewana3_1782	0.32	-0.3
2,100,721	+		Shewana3_1782	0.32	-0.5
2,100,721	+		Shewana3_1782	0.32	+0.3
2,100,721	+		Shewana3_1782	0.32	-1.2
2,100,721	+		Shewana3_1782	0.32	+0.5
2,100,721	+		Shewana3_1782	0.32	-1.0
2,100,729	-		Shewana3_1782	0.32	+0.1
2,100,958	+		Shewana3_1782	0.49	+1.6
2,100,958	+		Shewana3_1782	0.49	+0.6
2,100,966	-		Shewana3_1782	0.50	+0.6
2,101,013	-		Shewana3_1782	0.53	-0.7
2,101,073	+		Shewana3_1782	0.57	-1.2