Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1730
Experiment: Rifampicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,039,080 | + | Shewana3_1730 | 0.62 | +0.5 | |
2,039,203 | - | Shewana3_1730 | 0.78 | +0.5 | |
2,039,221 | - | Shewana3_1730 | 0.80 | +0.9 | |
2,039,616 | - | +1.5 | |||
2,039,618 | + | +1.2 | |||
2,039,976 | + | cysB | Shewana3_1731 | 0.38 | +2.8 |
Or see this region's nucleotide sequence