Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1586

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,861,622	+	cpdB	Shewana3_1585	0.87	+1.3
1,861,630	-	cpdB	Shewana3_1585	0.87	+2.3
1,861,630	-	cpdB	Shewana3_1585	0.87	-0.5
1,861,787	-				+2.3
1,861,960	-				-0.1
1,861,982	+				-0.0
1,862,364	+				-0.9
1,862,562	+				+1.3
1,862,737	-				-0.0
1,862,765	+				-0.7
1,863,299	-		Shewana3_1586	0.33	-1.1
1,863,363	-		Shewana3_1586	0.36	+0.7
1,863,622	-		Shewana3_1586	0.48	-1.5
1,863,742	-		Shewana3_1586	0.54	+2.3
1,863,842	-		Shewana3_1586	0.58	+0.7
1,863,890	-		Shewana3_1586	0.61	-0.0
1,863,922	+		Shewana3_1586	0.62	-1.1
1,863,922	+		Shewana3_1586	0.62	-0.6
1,863,930	-		Shewana3_1586	0.62	+2.3
1,863,930	-		Shewana3_1586	0.62	+0.5
1,863,949	+		Shewana3_1586	0.63	-1.8
1,863,963	-		Shewana3_1586	0.64	-1.5
1,864,006	+		Shewana3_1586	0.66	-1.3
1,864,038	+				+1.3
1,864,671	-				+1.3
1,864,904	+				+1.3
1,864,904	+				+0.6
1,864,922	-				+0.3
1,864,993	-				+1.1
1,865,130	+		Shewana3_1587	0.27	+1.9
1,865,512	+		Shewana3_1587	0.88	-0.0
1,865,560	+				-0.6