Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1555

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,810,475	+				+0.7
1,810,568	-				-0.2
1,810,797	-	pflA	Shewana3_1554	0.40	-0.7
1,810,865	-	pflA	Shewana3_1554	0.50	+0.8
1,810,965	-	pflA	Shewana3_1554	0.63	-0.5
1,811,141	+	pflA	Shewana3_1554	0.87	-0.0
1,811,156	+	pflA	Shewana3_1554	0.89	-0.0
1,811,318	+				-0.3
1,811,374	+				+0.3
1,811,382	-				-0.5
1,811,660	+		Shewana3_1555	0.16	+0.6
1,811,712	-		Shewana3_1555	0.18	+0.5
1,811,779	-		Shewana3_1555	0.21	+0.7
1,811,944	+		Shewana3_1555	0.28	+1.7
1,812,029	+		Shewana3_1555	0.32	-1.0
1,812,106	+		Shewana3_1555	0.35	-0.3
1,812,387	-		Shewana3_1555	0.48	+0.5
1,812,397	-		Shewana3_1555	0.48	+0.6
1,812,397	-		Shewana3_1555	0.48	+1.8
1,812,397	-		Shewana3_1555	0.48	-0.3
1,812,694	-		Shewana3_1555	0.61	+0.5
1,812,984	-		Shewana3_1555	0.74	-0.2
1,812,984	-		Shewana3_1555	0.74	-0.9
1,813,041	+		Shewana3_1555	0.76	+0.7
1,813,062	+		Shewana3_1555	0.77	-0.9
1,813,163	+		Shewana3_1555	0.82	+0.7
1,813,163	+		Shewana3_1555	0.82	+1.3
1,813,163	+				+2.3
1,813,171	-		Shewana3_1555	0.82	+1.3
1,813,171	-		Shewana3_1555	0.82	+0.6
1,813,229	-		Shewana3_1555	0.84	+0.4
1,813,279	-		Shewana3_1555	0.87	+0.2
1,813,314	+		Shewana3_1555	0.88	+0.7
1,813,680	+				-0.0
1,813,860	-				+0.3
1,813,942	-				-0.8
1,814,030	-				+0.9
1,814,059	-				+0.1
1,814,284	-				-1.1
1,814,527	+				+0.1