Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1479
Experiment: Rifampicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,721,504 | - | Shewana3_1478 | 0.83 | -0.4 | |
1,721,898 | - | +1.5 | |||
1,721,978 | + | -0.6 | |||
1,722,336 | + | truA | Shewana3_1479 | 0.21 | +1.4 |
1,722,405 | + | truA | Shewana3_1479 | 0.30 | +0.4 |
1,722,484 | + | truA | Shewana3_1479 | 0.40 | -0.7 |
1,722,807 | + | truA | Shewana3_1479 | 0.81 | -0.7 |
1,722,858 | + | truA | Shewana3_1479 | 0.88 | +0.2 |
1,722,865 | + | truA | Shewana3_1479 | 0.88 | +0.9 |
1,723,001 | + | -1.2 |
Or see this region's nucleotide sequence