Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1207

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,410,235	-				-1.0
1,410,235	-				+0.3
1,410,247	-				+0.7
1,410,248	-				-0.5
1,410,428	+		Shewana3_1206	0.14	+2.1
1,410,436	-		Shewana3_1206	0.14	+1.8
1,410,443	+		Shewana3_1206	0.15	+2.1
1,410,471	+		Shewana3_1206	0.19	+2.1
1,410,498	+		Shewana3_1206	0.22	+1.1
1,410,506	-		Shewana3_1206	0.23	+0.8
1,410,506	-		Shewana3_1206	0.23	-0.2
1,410,506	-		Shewana3_1206	0.23	+0.2
1,410,587	+		Shewana3_1206	0.33	-0.5
1,410,595	-		Shewana3_1206	0.34	+0.4
1,410,693	+				+1.1
1,410,798	+		Shewana3_1206	0.58	+1.1
1,410,798	-		Shewana3_1206	0.58	+0.6
1,410,798	-		Shewana3_1206	0.58	+0.5
1,410,826	-		Shewana3_1206	0.62	-0.5
1,410,853	+		Shewana3_1206	0.65	+0.5
1,410,942	-		Shewana3_1206	0.76	-0.5
1,410,942	-		Shewana3_1206	0.76	-0.8
1,410,952	+		Shewana3_1206	0.77	+2.1
1,410,955	-		Shewana3_1206	0.77	-0.3
1,410,990	+		Shewana3_1206	0.81	+2.1
1,411,008	-		Shewana3_1206	0.84	-0.1
1,411,101	-				+0.5
1,411,257	-		Shewana3_1207	0.14	-0.3
1,411,281	-		Shewana3_1207	0.18	-0.3
1,411,442	+		Shewana3_1207	0.46	-1.8
1,411,450	-		Shewana3_1207	0.48	+0.6
1,411,539	+		Shewana3_1207	0.63	+0.5
1,411,567	-		Shewana3_1207	0.68	+0.3
1,411,620	-		Shewana3_1207	0.77	+0.6
1,411,688	+		Shewana3_1207	0.89	-1.2
1,411,728	-				+0.1
1,411,830	-				-0.4
1,411,830	-				-0.7
1,411,915	+				-1.0
1,411,996	-				-0.9
1,412,067	-				-1.3
1,412,077	-				-0.3
1,412,144	+				+0.1
1,412,157	+		Shewana3_1208	0.10	+0.2
1,412,173	-		Shewana3_1208	0.12	+0.1
1,412,211	+		Shewana3_1208	0.16	+1.4
1,412,280	-		Shewana3_1208	0.22	+1.9
1,412,552	+		Shewana3_1208	0.49	+0.1
1,412,552	+		Shewana3_1208	0.49	-0.3
1,412,560	-		Shewana3_1208	0.50	+1.2
1,412,593	-		Shewana3_1208	0.53	-2.2
1,412,670	+		Shewana3_1208	0.61	+0.1