Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1163
Experiment: Rifampicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,373,180 | + | Shewana3_1162 | 0.44 | -0.2 | |
1,373,390 | - | Shewana3_1162 | 0.61 | -0.6 | |
1,373,575 | - | Shewana3_1162 | 0.76 | -0.7 | |
1,373,698 | + | Shewana3_1162 | 0.86 | +0.1 | |
1,374,007 | - | +0.0 | |||
1,374,248 | + | Shewana3_1163 | 0.21 | -0.2 | |
1,374,396 | + | Shewana3_1163 | 0.50 | -1.2 | |
1,375,093 | - | Shewana3_1164 | 0.25 | -0.7 | |
1,375,156 | + | Shewana3_1164 | 0.32 | -2.3 | |
1,375,262 | + | Shewana3_1164 | 0.43 | -0.5 |
Or see this region's nucleotide sequence