Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0950

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,110,317	+		Shewana3_0949	0.26	+0.2
1,110,317	+		Shewana3_0949	0.26	-0.2
1,110,325	-		Shewana3_0949	0.27	+1.8
1,110,351	+		Shewana3_0949	0.29	-0.3
1,110,384	-		Shewana3_0949	0.32	-1.1
1,110,527	-		Shewana3_0949	0.46	-1.9
1,110,527	-		Shewana3_0949	0.46	-0.4
1,110,646	+		Shewana3_0949	0.57	+0.1
1,110,646	+		Shewana3_0949	0.57	+1.0
1,110,798	+		Shewana3_0949	0.71	+1.0
1,110,841	-		Shewana3_0949	0.75	-1.8
1,110,873	-		Shewana3_0949	0.78	-0.2
1,110,930	+		Shewana3_0949	0.83	-0.4
1,111,187	+				+0.4
1,111,187	+				-0.5
1,111,195	-				-1.5
1,111,195	-				-1.2
1,111,344	-				+0.1
1,111,382	+				-1.5
1,111,463	-		Shewana3_0950	0.12	+0.4
1,111,564	+		Shewana3_0950	0.19	-1.7
1,111,617	+		Shewana3_0950	0.22	+0.2
1,111,632	-		Shewana3_0950	0.23	+0.0
1,111,632	-		Shewana3_0950	0.23	-0.2
1,111,683	-		Shewana3_0950	0.27	+0.2
1,111,750	+		Shewana3_0950	0.31	+0.1
1,111,891	-		Shewana3_0950	0.41	+0.0
1,111,893	+		Shewana3_0950	0.41	+1.0
1,111,893	+		Shewana3_0950	0.41	+0.5
1,111,901	-		Shewana3_0950	0.42	+0.1
1,112,097	-		Shewana3_0950	0.55	-0.4
1,112,184	-		Shewana3_0950	0.61	-0.1
1,112,251	+		Shewana3_0950	0.66	+0.4
1,112,259	-		Shewana3_0950	0.66	+0.9
1,112,299	-		Shewana3_0950	0.69	-0.1
1,112,393	-		Shewana3_0950	0.75	+1.3
1,112,393	-		Shewana3_0950	0.75	+0.1
1,112,518	+		Shewana3_0950	0.84	-0.7
1,112,736	-				-0.3
1,112,778	-				-0.1
1,112,843	+				+0.7
1,113,039	+				-0.5
1,113,143	+		Shewana3_0951	0.11	+0.6
1,113,303	-		Shewana3_0951	0.22	-0.1
1,113,381	+		Shewana3_0951	0.27	+0.0
1,113,389	-		Shewana3_0951	0.27	-0.0
1,113,389	-		Shewana3_0951	0.27	+0.2
1,113,389	-		Shewana3_0951	0.27	-0.0
1,113,733	-		Shewana3_0951	0.49	+0.1