Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0917

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,071,168	+				+2.2
1,071,171	+				+0.3
1,071,173	+				+0.5
1,071,173	+				+0.2
1,071,181	-				-1.6
1,071,313	-				-0.8
1,071,313	-				-0.2
1,071,314	+				+2.5
1,071,466	-				+0.0
1,071,503	+		Shewana3_0916	0.11	-0.3
1,071,504	+		Shewana3_0916	0.11	+1.0
1,071,629	-		Shewana3_0916	0.29	-1.6
1,071,645	-		Shewana3_0916	0.31	-0.3
1,071,702	+		Shewana3_0916	0.39	-0.7
1,071,720	-		Shewana3_0916	0.42	-0.1
1,071,733	+		Shewana3_0916	0.44	+0.5
1,071,756	-		Shewana3_0916	0.47	-3.5
1,071,835	+		Shewana3_0916	0.58	+0.4
1,072,145	-				-0.5
1,072,332	-		Shewana3_0917	0.27	+1.0
1,072,381	+		Shewana3_0917	0.34	+0.0
1,072,391	+		Shewana3_0917	0.35	+0.4
1,072,460	+		Shewana3_0917	0.45	+0.4
1,072,554	-		Shewana3_0917	0.59	+0.1
1,072,586	-		Shewana3_0917	0.64	+1.5
1,072,645	-		Shewana3_0917	0.72	+0.1
1,072,689	+		Shewana3_0917	0.78	-0.5
1,072,736	-		Shewana3_0917	0.85	-0.6
1,072,747	+		Shewana3_0917	0.87	-0.1
1,072,884	+				+0.3
1,072,892	-				-0.1
1,072,981	-				-0.9
1,073,493	-		Shewana3_0918	0.35	+0.3
1,073,525	-		Shewana3_0918	0.38	-0.1
1,073,680	+		Shewana3_0918	0.49	+2.0
1,073,813	+		Shewana3_0918	0.59	-0.1
1,073,835	-		Shewana3_0918	0.61	+0.5