Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0870

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,014,684	-		Shewana3_0869	0.27	-0.7
1,014,721	+		Shewana3_0869	0.32	+0.2
1,014,876	-		Shewana3_0869	0.50	-1.4
1,014,893	+		Shewana3_0869	0.52	-0.6
1,014,903	+		Shewana3_0869	0.53	-0.6
1,014,903	+		Shewana3_0869	0.53	-0.4
1,014,903	+		Shewana3_0869	0.53	-0.6
1,014,903	+		Shewana3_0869	0.53	-0.3
1,014,903	+		Shewana3_0869	0.53	-0.8
1,014,911	-		Shewana3_0869	0.54	-0.4
1,014,911	-		Shewana3_0869	0.54	-0.5
1,014,918	+		Shewana3_0869	0.55	-1.1
1,014,918	+		Shewana3_0869	0.55	+0.0
1,014,918	+		Shewana3_0869	0.55	+0.6
1,014,926	-		Shewana3_0869	0.56	-0.3
1,014,926	-		Shewana3_0869	0.56	-1.3
1,014,926	-		Shewana3_0869	0.56	-0.9
1,014,926	-		Shewana3_0869	0.56	-2.6
1,015,239	-				+0.3
1,015,295	+				-1.4
1,015,295	+				+2.3
1,015,296	-				-0.3
1,015,303	-				-0.4
1,015,303	-				-0.9
1,015,332	+				-0.6
1,015,340	-				-0.5
1,015,356	+				-0.0
1,015,373	+				+0.2
1,015,593	-		Shewana3_0870	0.14	+0.7
1,015,620	-		Shewana3_0870	0.17	-1.2
1,015,726	+		Shewana3_0870	0.25	-0.5
1,015,734	-		Shewana3_0870	0.26	-0.3
1,015,834	-		Shewana3_0870	0.34	+1.6
1,015,893	+		Shewana3_0870	0.39	+0.6
1,015,948	-		Shewana3_0870	0.44	+0.0
1,016,064	-		Shewana3_0870	0.53	+0.0
1,016,068	+		Shewana3_0870	0.54	-0.2
1,016,068	+		Shewana3_0870	0.54	-0.4
1,016,076	-		Shewana3_0870	0.54	+0.9
1,016,162	-		Shewana3_0870	0.62	-0.6
1,016,163	-		Shewana3_0870	0.62	-0.6
1,016,163	-		Shewana3_0870	0.62	-0.8
1,016,238	+		Shewana3_0870	0.68	-0.4
1,016,251	+		Shewana3_0870	0.69	-0.5
1,016,263	-		Shewana3_0870	0.70	-0.4
1,016,273	+		Shewana3_0870	0.71	-0.3
1,016,331	+		Shewana3_0870	0.76	-1.8
1,016,339	-		Shewana3_0870	0.76	-1.2
1,016,374	-		Shewana3_0870	0.79	-1.3
1,016,374	-		Shewana3_0870	0.79	-0.8
1,016,381	+		Shewana3_0870	0.80	+0.2
1,016,381	+		Shewana3_0870	0.80	-0.6
1,016,389	-		Shewana3_0870	0.80	-0.7
1,016,465	+		Shewana3_0870	0.87	+0.5
1,016,465	+		Shewana3_0870	0.87	-0.9
1,016,694	+				-2.7
1,016,956	-				-0.4
1,017,147	+		Shewana3_0871	0.16	-0.3
1,017,157	+		Shewana3_0871	0.17	-0.5
1,017,243	+		Shewana3_0871	0.34	+1.2
1,017,250	+		Shewana3_0871	0.35	-0.8
1,017,414	-		Shewana3_0871	0.67	-1.2