Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0133

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
147,528	-				-0.0
147,581	+				-1.5
147,592	+				+0.0
147,602	+				-0.5
147,661	-				-0.4
147,949	+		Shewana3_0132	0.18	+2.0
148,042	+		Shewana3_0132	0.35	+0.4
148,218	+		Shewana3_0132	0.68	-0.0
148,646	+				-0.3
148,690	-				+0.0
148,716	-				+0.1
148,804	-		Shewana3_0133	0.10	-1.3
148,861	+		Shewana3_0133	0.12	-0.1
148,931	+		Shewana3_0133	0.14	-4.4
148,945	+		Shewana3_0133	0.15	-0.2
148,945	-		Shewana3_0133	0.15	+0.5
148,975	+		Shewana3_0133	0.16	-0.0
149,027	+		Shewana3_0133	0.17	-0.6
149,104	+		Shewana3_0133	0.20	+0.9
149,132	+		Shewana3_0133	0.21	-0.2
149,145	-		Shewana3_0133	0.21	-0.3
149,150	-		Shewana3_0133	0.21	-0.1
149,150	-		Shewana3_0133	0.21	+1.3
149,150	-		Shewana3_0133	0.21	-0.5
149,234	+		Shewana3_0133	0.24	-0.2
149,277	-		Shewana3_0133	0.25	-0.9
149,462	-		Shewana3_0133	0.31	-0.3
149,518	-		Shewana3_0133	0.33	-0.5
149,526	-		Shewana3_0133	0.33	-1.0
149,703	+		Shewana3_0133	0.38	-0.2
149,768	-		Shewana3_0133	0.40	-1.0
149,786	-		Shewana3_0133	0.41	+0.5
149,786	-		Shewana3_0133	0.41	-0.4
149,880	+		Shewana3_0133	0.44	-0.4
149,888	-		Shewana3_0133	0.44	+0.3
149,915	+		Shewana3_0133	0.45	-0.0
150,177	+		Shewana3_0133	0.53	-0.2
150,394	+		Shewana3_0133	0.60	-0.1
150,432	+		Shewana3_0133	0.61	-0.5
150,521	-		Shewana3_0133	0.64	-0.3
150,531	-		Shewana3_0133	0.64	-0.9
150,558	-		Shewana3_0133	0.65	-0.8
150,651	+		Shewana3_0133	0.68	+0.3
150,685	+		Shewana3_0133	0.69	-0.2
150,685	+		Shewana3_0133	0.69	-0.0
150,693	-		Shewana3_0133	0.69	-2.3
150,693	-		Shewana3_0133	0.69	-0.4
150,760	-		Shewana3_0133	0.71	+0.0
150,760	-		Shewana3_0133	0.71	-0.3
150,921	+		Shewana3_0133	0.76	-0.1
150,949	+		Shewana3_0133	0.77	+0.3
150,957	-		Shewana3_0133	0.77	-1.1
150,957	-		Shewana3_0133	0.77	+1.0
150,957	-		Shewana3_0133	0.77	-0.9
150,957	-		Shewana3_0133	0.77	-0.6
151,013	-		Shewana3_0133	0.79	-0.7
151,018	+		Shewana3_0133	0.79	+0.1
151,200	+		Shewana3_0133	0.85	+2.1
151,220	+		Shewana3_0133	0.85	-0.4
151,286	+		Shewana3_0133	0.87	+0.0
151,316	-		Shewana3_0133	0.88	-0.2
151,324	-		Shewana3_0133	0.88	-1.7
151,324	-		Shewana3_0133	0.88	-1.0
151,324	-		Shewana3_0133	0.88	-1.5
151,324	-		Shewana3_0133	0.88	+0.3
151,360	+		Shewana3_0133	0.90	+0.1
151,368	-		Shewana3_0133	0.90	+0.1
151,381	+				-0.1
151,381	+				-0.5
151,389	-				-0.2
151,389	-				-0.2
151,424	+				-0.4
151,431	+				-0.1
151,475	+				+0.1
151,524	+				-0.3
151,673	-				+0.6
152,074	+				-0.4
152,114	-				-0.0
152,123	+				-0.2
152,131	-	ribB	Shewana3_0134	0.11	-0.4
152,131	-	ribB	Shewana3_0134	0.11	-0.2
152,177	-	ribB	Shewana3_0134	0.18	+0.1
152,305	+	ribB	Shewana3_0134	0.37	-0.5
152,342	-	ribB	Shewana3_0134	0.43	-0.1
152,486	-	ribB	Shewana3_0134	0.65	-0.1