Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0059

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
68,942	-		Shewana3_0057	0.82	+0.1
69,152	+				+0.2
69,152	+				-0.9
69,152	+				-0.8
69,160	-				+0.1
69,160	-				+0.1
69,160	-				-0.5
69,174	+				-0.1
69,192	-				-1.7
69,245	-				-0.5
69,261	+		Shewana3_0058	0.11	-0.1
69,269	-		Shewana3_0058	0.12	-0.1
69,310	-		Shewana3_0058	0.18	-0.7
69,323	+		Shewana3_0058	0.19	-0.1
69,391	-		Shewana3_0058	0.29	-0.2
69,480	+		Shewana3_0058	0.42	-0.5
69,495	-		Shewana3_0058	0.44	-0.2
69,566	+		Shewana3_0058	0.54	-0.4
69,699	+		Shewana3_0058	0.73	-0.3
69,699	+		Shewana3_0058	0.73	+0.5
69,860	+				-0.6
69,907	+				-0.3
69,927	+				+0.4
69,927	+				-0.3
69,927	+				-0.1
69,935	-				-0.3
69,935	-				-0.2
69,935	-				+1.5
69,935	-				-0.4
70,150	-		Shewana3_0059	0.32	+0.3
70,151	-		Shewana3_0059	0.32	-0.8
70,339	+		Shewana3_0059	0.59	+0.0
70,386	+		Shewana3_0059	0.66	+0.3
70,399	+		Shewana3_0059	0.68	+0.1
70,454	+		Shewana3_0059	0.76	-0.2
70,462	-		Shewana3_0059	0.77	-0.8
70,462	-		Shewana3_0059	0.77	-0.0
70,649	-				+0.2
70,673	-				-3.3
70,733	+		Shewana3_0060	0.11	-5.0
70,734	+		Shewana3_0060	0.11	-0.5
70,742	-		Shewana3_0060	0.12	-0.5
70,779	-		Shewana3_0060	0.15	-0.0
70,779	-		Shewana3_0060	0.15	+0.2
70,816	-		Shewana3_0060	0.19	+0.1
70,823	-		Shewana3_0060	0.19	+0.4
70,823	-		Shewana3_0060	0.19	-0.0
70,828	-		Shewana3_0060	0.20	-0.1
70,850	+		Shewana3_0060	0.22	+1.2
70,876	-		Shewana3_0060	0.24	+0.0
70,907	+		Shewana3_0060	0.27	+0.2
70,915	-		Shewana3_0060	0.28	-0.2
71,019	-		Shewana3_0060	0.38	-0.3
71,034	+		Shewana3_0060	0.40	-0.0
71,185	-		Shewana3_0060	0.54	-0.4
71,495	-		Shewana3_0060	0.84	-0.2
71,549	-		Shewana3_0060	0.89	+0.3
71,571	+				-0.2