Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4280

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
160,919	-		Shewana3_4279	0.15	-2.0
160,926	-		Shewana3_4279	0.16	-0.7
161,111	+		Shewana3_4279	0.57	+0.9
161,235	-		Shewana3_4279	0.85	-1.2
161,254	-		Shewana3_4279	0.89	+0.0
161,298	+				-1.6
161,306	-				-2.9
161,306	-				-1.2
161,312	+				-0.2
161,312	-				-1.1
161,320	-				-0.9
161,320	-				+0.4
161,544	+				-0.1
161,544	+				+0.2
161,768	-				-0.4
161,774	-				-0.6
161,908	+				+0.4
161,933	-		Shewana3_4280	0.11	-0.8
161,964	-		Shewana3_4280	0.12	-0.9
162,001	-		Shewana3_4280	0.14	+1.6
162,031	+		Shewana3_4280	0.15	+0.5
162,169	-		Shewana3_4280	0.21	+0.6
162,263	-		Shewana3_4280	0.25	-1.3
162,359	-		Shewana3_4280	0.29	-2.3
162,374	+		Shewana3_4280	0.29	-0.8
162,385	+		Shewana3_4280	0.30	-0.9
162,385	+		Shewana3_4280	0.30	-1.4
162,393	-		Shewana3_4280	0.30	-1.1
162,393	-		Shewana3_4280	0.30	-0.6
162,393	-		Shewana3_4280	0.30	-2.1
162,393	-		Shewana3_4280	0.30	-1.1
162,525	-		Shewana3_4280	0.36	+1.7
162,552	+		Shewana3_4280	0.37	-0.7
162,566	+		Shewana3_4280	0.37	-0.3
162,574	-		Shewana3_4280	0.38	-0.0
162,667	-		Shewana3_4280	0.41	-1.6
162,717	+		Shewana3_4280	0.44	-0.6
162,751	+		Shewana3_4280	0.45	-0.1
162,756	+		Shewana3_4280	0.45	+1.6
162,790	-		Shewana3_4280	0.47	-1.4
162,792	+		Shewana3_4280	0.47	-0.1
162,870	+		Shewana3_4280	0.50	+0.0
162,892	+		Shewana3_4280	0.51	+0.3
162,926	-		Shewana3_4280	0.52	+0.9
162,997	+		Shewana3_4280	0.55	-0.3
163,005	+		Shewana3_4280	0.56	-0.6
163,005	+		Shewana3_4280	0.56	-0.3
163,005	+		Shewana3_4280	0.56	-0.5
163,013	-		Shewana3_4280	0.56	-1.7
163,013	-		Shewana3_4280	0.56	-1.6
163,013	-		Shewana3_4280	0.56	-0.3
163,013	-		Shewana3_4280	0.56	+0.0
163,013	-		Shewana3_4280	0.56	-0.8
163,013	-		Shewana3_4280	0.56	-0.5
163,013	-		Shewana3_4280	0.56	-0.5
163,024	+		Shewana3_4280	0.56	+2.1
163,029	+		Shewana3_4280	0.57	-1.6
163,037	-		Shewana3_4280	0.57	+0.0
163,152	-		Shewana3_4280	0.62	-1.2
163,201	-		Shewana3_4280	0.64	-1.6
163,304	+		Shewana3_4280	0.68	+0.7
163,467	+		Shewana3_4280	0.75	-0.3
163,532	+		Shewana3_4280	0.78	-0.6
163,532	+		Shewana3_4280	0.78	+0.3
163,540	-		Shewana3_4280	0.78	-1.7
163,540	-		Shewana3_4280	0.78	-1.2
163,556	+		Shewana3_4280	0.79	-0.6
163,557	+		Shewana3_4280	0.79	+0.4
163,565	-		Shewana3_4280	0.79	-0.9
163,640	+		Shewana3_4280	0.82	-2.0
163,662	+		Shewana3_4280	0.83	-2.2
163,667	+		Shewana3_4280	0.83	-0.9
163,825	-				+2.2
163,825	-				-0.0
163,825	-				-0.7
163,897	+				-0.6
164,004	-				+0.3
164,111	-				-1.7
164,111	-				+0.7
164,205	+				+1.2
164,213	-				-0.4
164,213	-				-0.6
164,268	+				-1.3
164,274	+				-1.4
164,571	-		Shewana3_4281	0.21	+0.3
164,705	-		Shewana3_4281	0.26	-0.4
164,792	-		Shewana3_4281	0.30	+0.0