Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4743

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
6,221,812	+		BT4741	0.88	+0.2
6,221,813	-		BT4741	0.88	+0.2
6,221,825	-		BT4741	0.89	+0.1
6,221,844	-				-1.7
6,221,889	-				-0.5
6,221,889	-				-3.3
6,221,913	+				-0.3
6,221,967	-				+1.7
6,222,013	+				-3.1
6,222,077	+				-2.1
6,222,154	+				-0.8
6,222,155	-				+0.7
6,222,269	+				-1.1
6,222,279	+				+0.3
6,222,279	+				+0.1
6,222,294	+				-1.8
6,222,294	+				-2.5
6,222,354	-				-0.9
6,222,488	+				+0.1
6,222,489	-				+2.7
6,222,494	-				-0.6
6,222,631	-				-0.3
6,222,689	+				-0.6
6,222,705	+				-0.5
6,222,705	+				-1.0
6,222,706	-				+0.4
6,222,706	-				-2.3
6,222,710	+				+0.8
6,222,710	+				-0.9
6,222,865	+		BT4743	0.24	-2.2
6,222,865	+		BT4743	0.24	-0.9
6,222,866	-		BT4743	0.25	+0.2
6,222,866	-		BT4743	0.25	+0.7
6,222,866	-		BT4743	0.25	+0.1
6,222,917	-		BT4743	0.45	-2.1
6,222,942	+		BT4743	0.55	-2.3
6,222,943	-		BT4743	0.56	-2.5
6,222,983	+		BT4743	0.72	-1.8
6,222,990	-		BT4743	0.75	-2.9
6,223,032	-				-0.7
6,223,032	-				-3.3
6,223,035	-				-1.3
6,223,063	+				-0.7
6,223,079	+				+0.3
6,223,079	+				+1.7
6,223,080	-				-0.3
6,223,081	+				-0.3
6,223,097	+				+0.9
6,223,097	+				-1.7
6,223,098	-				-0.1
6,223,142	+				-1.3
6,223,142	+				-1.1
6,223,155	+				-0.9
6,223,229	-				+0.4
6,223,239	-				-1.2
6,223,263	+				-0.6
6,223,268	-				-1.3
6,223,268	-				-2.7
6,223,268	-				+0.2
6,223,282	-				-0.9
6,223,284	+				-2.5
6,223,284	+				-0.9
6,223,285	-				-0.0
6,223,285	-				+0.0
6,223,285	-				+0.0
6,223,322	+				+1.2
6,223,323	-				+0.6
6,223,324	+				-2.3
6,223,325	-				+0.5
6,223,333	+				+0.6
6,223,333	+				+0.7
6,223,348	-				+0.4
6,223,354	-				-1.7
6,223,367	+				+0.3
6,223,368	-				+1.0
6,223,372	-				+0.5
6,223,439	-				+0.2
6,223,502	-				-2.1
6,223,525	-				+1.2
6,223,544	+				-0.6
6,223,571	+		BT4744	0.10	-2.1
6,223,582	+		BT4744	0.11	-0.3
6,223,625	+		BT4744	0.14	+0.5
6,223,647	-		BT4744	0.16	-1.9
6,223,712	+		BT4744	0.21	-1.7
6,223,739	-		BT4744	0.23	-1.6
6,223,794	-		BT4744	0.28	+0.2
6,223,888	+		BT4744	0.35	-3.4
6,223,888	+		BT4744	0.35	+0.1
6,223,890	+		BT4744	0.35	-2.0
6,223,890	+		BT4744	0.35	-0.5
6,224,000	+		BT4744	0.44	+0.9