Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4543

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
5,962,418	+		BT4541	0.15	+0.2
5,962,419	-		BT4541	0.15	-0.2
5,962,440	+		BT4541	0.18	-2.2
5,962,464	-		BT4541	0.22	-0.4
5,962,468	-		BT4541	0.23	-0.4
5,962,469	+		BT4541	0.23	-1.9
5,962,475	+		BT4541	0.24	+0.1
5,962,476	-		BT4541	0.24	-2.4
5,962,525	-		BT4541	0.33	-0.8
5,962,526	+		BT4541	0.33	-1.0
5,962,556	-		BT4541	0.38	+1.0
5,962,559	-		BT4541	0.38	-1.8
5,962,564	+		BT4541	0.39	-0.4
5,962,587	+		BT4541	0.43	+1.0
5,962,588	-		BT4541	0.43	-2.1
5,962,598	+		BT4541	0.45	+0.1
5,962,598	+		BT4541	0.45	+1.4
5,962,601	+		BT4541	0.45	+0.6
5,962,609	-		BT4541	0.46	-2.2
5,962,623	-		BT4541	0.49	-2.7
5,962,623	-		BT4541	0.49	+1.3
5,962,688	+		BT4541	0.60	+0.2
5,962,892	+				-1.2
5,962,892	+				-0.3
5,962,899	-				+0.2
5,962,946	-		BT4542	0.15	-0.0
5,962,956	+		BT4542	0.17	-0.6
5,962,964	-		BT4542	0.18	+0.6
5,962,966	-		BT4542	0.18	-0.2
5,962,995	+		BT4542	0.24	-0.4
5,963,004	-		BT4542	0.25	-1.0
5,963,067	-		BT4542	0.37	+2.6
5,963,068	+		BT4542	0.37	-1.2
5,963,069	-		BT4542	0.37	+0.8
5,963,103	+		BT4542	0.43	+0.6
5,963,119	+		BT4542	0.46	+1.4
5,963,123	+		BT4542	0.47	-2.9
5,963,167	-		BT4542	0.55	-0.5
5,963,167	-		BT4542	0.55	-2.2
5,963,178	+		BT4542	0.57	-0.6
5,963,207	-		BT4542	0.62	+0.1
5,963,216	-		BT4542	0.63	-1.9
5,963,251	+		BT4542	0.70	-1.9
5,963,264	+		BT4542	0.72	-0.9
5,963,265	-		BT4542	0.72	+0.5
5,963,313	-		BT4542	0.81	-0.2
5,963,333	+		BT4542	0.85	+0.7
5,963,340	+		BT4542	0.86	+2.0
5,963,374	+				-0.2
5,963,375	-				-3.1
5,963,392	+				+0.8
5,963,393	-				-0.5
5,963,436	+				+0.0
5,963,437	-				-0.6
5,963,452	+				+0.8
5,963,471	-				-1.3
5,963,473	+				-3.1
5,963,496	-				+1.4
5,963,516	+				-0.5
5,963,549	+		BT4543	0.12	-3.6
5,963,570	-		BT4543	0.14	-0.2
5,963,570	-		BT4543	0.14	-0.4
5,963,610	+		BT4543	0.17	-1.7
5,963,654	-		BT4543	0.21	-0.1
5,963,724	-		BT4543	0.27	-1.0
5,963,800	+		BT4543	0.34	-2.3
5,963,800	+		BT4543	0.34	+0.2
5,963,832	-		BT4543	0.37	-1.1
5,963,843	-		BT4543	0.38	-1.3
5,963,875	+		BT4543	0.40	-0.9
5,963,884	+		BT4543	0.41	-0.1
5,963,956	+		BT4543	0.48	-0.9
5,964,009	-		BT4543	0.52	-2.0
5,964,031	+		BT4543	0.54	-1.1
5,964,163	+		BT4543	0.66	-1.2
5,964,163	+		BT4543	0.66	-0.9
5,964,164	-		BT4543	0.66	+1.1
5,964,164	-		BT4543	0.66	-1.9
5,964,195	+		BT4543	0.68	-1.9
5,964,258	+		BT4543	0.74	+0.5
5,964,377	-		BT4543	0.84	-1.4
5,964,391	+		BT4543	0.86	-2.4
5,964,409	+		BT4543	0.87	+0.1
5,964,410	-		BT4543	0.87	-2.8
5,964,582	-				+0.1
5,964,588	-				+0.9
5,964,631	+				-0.1
5,964,631	+				+0.8
5,964,657	+				+0.6
5,964,684	+				+0.3
5,964,684	+				-0.6
5,964,692	-				+0.1
5,964,870	+		BT4544	0.29	-2.2
5,964,892	-		BT4544	0.31	-1.0
5,964,929	-		BT4544	0.35	+0.1
5,965,099	+		BT4544	0.54	+0.1
5,965,108	+		BT4544	0.55	+0.7
5,965,108	+		BT4544	0.55	+0.4
5,965,111	-		BT4544	0.55	+1.2
5,965,302	+		BT4544	0.76	-2.7
5,965,303	-		BT4544	0.76	-2.1
5,965,303	-		BT4544	0.76	-0.5
5,965,315	+		BT4544	0.77	-1.4
5,965,316	-		BT4544	0.77	-0.7
5,965,384	+		BT4544	0.85	-0.5
5,965,458	+				-1.6