Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4360

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
5,748,893	-		BT4359	0.79	-0.8
5,748,933	+		BT4359	0.81	+1.0
5,749,084	+		BT4359	0.87	-1.6
5,749,085	-		BT4359	0.88	-3.5
5,749,086	+		BT4359	0.88	-0.9
5,749,116	-		BT4359	0.89	+0.0
5,749,154	+				+1.9
5,749,154	+				-1.0
5,749,301	-				+0.1
5,749,374	+				-1.5
5,749,396	-				-0.2
5,749,619	-				-1.7
5,749,728	+				+0.1
5,749,775	+				-2.0
5,749,895	+		BT4360	0.18	-0.8
5,749,896	-		BT4360	0.18	-1.0
5,749,951	-		BT4360	0.30	-3.7
5,749,971	+		BT4360	0.35	-1.3
5,749,971	+		BT4360	0.35	-1.9
5,749,972	-		BT4360	0.35	-2.1
5,749,978	-		BT4360	0.36	+0.3
5,749,978	-		BT4360	0.36	-3.3
5,750,038	-		BT4360	0.50	-1.6
5,750,065	+		BT4360	0.56	-0.3
5,750,066	-		BT4360	0.56	-2.8
5,750,119	+		BT4360	0.68	-0.9
5,750,119	+		BT4360	0.68	-1.9
5,750,124	-		BT4360	0.69	-2.8
5,750,193	+		BT4360	0.85	-3.3
5,750,193	+		BT4360	0.85	-1.6
5,750,197	+				+0.7
5,750,198	-		BT4360	0.86	-1.9
5,750,262	-				-2.0
5,750,262	-				-1.4
5,750,262	-				-2.1
5,750,290	+				-1.6
5,750,305	-				+0.4
5,750,337	+				-1.1
5,750,379	+				-2.8
5,750,412	+				+0.1
5,750,412	+				+1.2
5,750,412	+				-1.8
5,750,552	+		BT4361	0.21	+0.1
5,750,609	+		BT4361	0.26	-1.9
5,750,610	-		BT4361	0.26	-0.8
5,750,706	-		BT4361	0.35	-1.9
5,750,706	-		BT4361	0.35	-1.9
5,750,797	+		BT4361	0.43	-0.2
5,750,867	-		BT4361	0.49	-3.2
5,750,872	-		BT4361	0.49	-1.2
5,750,901	-		BT4361	0.52	+0.7
5,750,926	+		BT4361	0.54	-0.1
5,750,966	+		BT4361	0.58	+1.4
5,750,966	+		BT4361	0.58	-1.8
5,750,967	-		BT4361	0.58	+0.2
5,751,015	+		BT4361	0.62	-0.4
5,751,015	+		BT4361	0.62	-1.4
5,751,016	-		BT4361	0.62	-0.7
5,751,180	+		BT4361	0.77	+0.8
5,751,186	+		BT4361	0.78	-0.6
5,751,186	+		BT4361	0.78	-0.8
5,751,187	-		BT4361	0.78	-0.4
5,751,197	+		BT4361	0.79	+1.3