Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2648

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
3,300,096	+		BT2647	0.15	-0.2
3,300,190	+		BT2647	0.23	-1.6
3,300,284	+		BT2647	0.32	-1.0
3,300,328	+		BT2647	0.36	-3.6
3,300,329	-		BT2647	0.36	+0.2
3,300,367	-		BT2647	0.39	-0.5
3,300,426	-		BT2647	0.44	+1.4
3,300,511	+		BT2647	0.52	+0.6
3,300,533	-		BT2647	0.54	-2.4
3,300,669	-		BT2647	0.66	+1.0
3,300,669	-		BT2647	0.66	-2.4
3,300,682	-		BT2647	0.67	-1.1
3,300,737	-		BT2647	0.72	+0.7
3,300,737	-		BT2647	0.72	-0.8
3,300,737	-		BT2647	0.72	-2.4
3,300,746	-		BT2647	0.73	-0.6
3,300,769	+		BT2647	0.75	+0.3
3,300,770	-		BT2647	0.75	-2.8
3,300,770	-		BT2647	0.75	+1.0
3,300,787	+		BT2647	0.77	-0.5
3,300,788	-		BT2647	0.77	-0.8
3,300,910	+		BT2647	0.88	+1.8
3,301,039	+				-0.3
3,301,103	+				+0.8
3,301,213	+		BT2648	0.23	-1.2
3,301,213	+		BT2648	0.23	-1.3
3,301,327	+		BT2648	0.39	+1.0
3,301,331	+		BT2648	0.39	-2.4
3,301,331	+		BT2648	0.39	-0.9
3,301,332	-		BT2648	0.40	-3.9
3,301,332	-		BT2648	0.40	-1.3
3,301,332	-		BT2648	0.40	-0.7
3,301,332	-				-1.0
3,301,332	-		BT2648	0.40	-2.3
3,301,332	-		BT2648	0.40	-0.3
3,301,337	-		BT2648	0.40	+0.6
3,301,420	+		BT2648	0.52	-0.5
3,301,420	+		BT2648	0.52	-0.1
3,301,448	+		BT2648	0.56	+1.4
3,301,448	+		BT2648	0.56	-0.3
3,301,449	-		BT2648	0.56	-1.5
3,301,449	-		BT2648	0.56	-0.8
3,301,492	+		BT2648	0.62	-2.4
3,301,493	-		BT2648	0.63	-1.3
3,301,715	+				+0.6
3,301,745	+				+0.9
3,301,767	+				-1.8
3,301,780	-				-2.2
3,301,795	-				-0.8
3,301,903	+		BT2649	0.19	-0.3
3,301,904	-		BT2649	0.19	+0.5
3,301,904	-		BT2649	0.19	+0.7
3,301,948	+		BT2649	0.25	+0.0
3,301,948	+		BT2649	0.25	+1.0
3,301,949	-		BT2649	0.25	+0.0
3,302,066	-		BT2649	0.39	+0.4
3,302,260	+		BT2649	0.64	-0.8
3,302,260	+		BT2649	0.64	-3.5
3,302,261	-		BT2649	0.64	-0.5
3,302,261	-		BT2649	0.64	-0.5
3,302,282	-		BT2649	0.66	-0.9
3,302,350	-		BT2649	0.75	+0.0
3,302,422	-		BT2649	0.84	+1.2
3,302,434	+		BT2649	0.85	-1.0
3,302,461	+		BT2649	0.89	+0.9
3,302,462	-		BT2649	0.89	-2.7
3,302,505	+				-2.3
3,302,505	+				+1.6
3,302,505	+				-2.4
3,302,505	+				+0.8
3,302,505	+				-0.6
3,302,506	-				+2.5
3,302,506	-				+0.6
3,302,507	+				-0.5
3,302,545	+				+1.0
3,302,548	-				-2.1
3,302,628	+				+0.8
3,302,629	-				+0.4
3,302,721	-		BT2650	0.11	-1.0
3,302,748	-		BT2650	0.14	+0.4