Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2245

Experiment: BHIS with Paraquat dichloride 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Paraquat dichloride 0.1 mg/ml
2,812,875	+		BT2244	0.17	+0.6
2,812,876	-		BT2244	0.17	-1.2
2,812,986	+		BT2244	0.27	+0.0
2,812,987	-		BT2244	0.27	-2.9
2,812,990	+		BT2244	0.27	-2.0
2,813,001	-		BT2244	0.28	-2.1
2,813,001	-		BT2244	0.28	-0.2
2,813,128	+		BT2244	0.40	+1.5
2,813,142	-		BT2244	0.41	-0.2
2,813,207	+		BT2244	0.47	-0.1
2,813,208	-		BT2244	0.47	+0.8
2,813,246	-		BT2244	0.51	-0.4
2,813,255	+		BT2244	0.52	-0.8
2,813,256	-		BT2244	0.52	-3.4
2,813,261	-		BT2244	0.52	-1.7
2,813,261	-		BT2244	0.52	+0.3
2,813,264	-		BT2244	0.53	+0.6
2,813,264	-		BT2244	0.53	-3.5
2,813,376	-		BT2244	0.63	+2.4
2,813,418	+		BT2244	0.67	+1.8
2,813,490	+		BT2244	0.73	+0.7
2,813,490	+		BT2244	0.73	-2.0
2,813,592	-		BT2244	0.83	-1.6
2,813,653	-		BT2244	0.88	-1.3
2,813,653	-		BT2244	0.88	+0.7
2,813,692	-				+0.6
2,813,878	+				-0.0
2,813,958	+		BT2245	0.18	-2.5
2,814,048	-				-0.8
2,814,141	+		BT2245	0.37	-1.2
2,814,141	+		BT2245	0.37	+0.5
2,814,142	-		BT2245	0.37	-2.6
2,814,209	+		BT2245	0.44	-1.1
2,814,316	+		BT2245	0.55	-0.8
2,814,466	+		BT2245	0.71	-2.4
2,814,544	+		BT2245	0.79	-0.2
2,814,545	-		BT2245	0.79	-0.6
2,814,601	-		BT2245	0.85	-3.9
2,814,601	-		BT2245	0.85	-1.2
2,814,726	+				-2.8
2,814,840	+				-1.3
2,815,016	-				+0.8
2,815,049	+				+0.7
2,815,050	-				+0.8
2,815,200	-		BT2246	0.17	-3.6
2,815,209	-		BT2246	0.17	-1.8
2,815,248	+		BT2246	0.19	+0.7
2,815,313	-		BT2246	0.22	+0.8
2,815,336	+		BT2246	0.23	-0.1
2,815,336	+		BT2246	0.23	-0.7
2,815,526	-		BT2246	0.32	-1.3
2,815,640	+		BT2246	0.38	+2.4
2,815,665	+		BT2246	0.39	-1.5
2,815,665	+		BT2246	0.39	-1.8
2,815,666	-		BT2246	0.39	+1.2
2,815,666	-		BT2246	0.39	+0.9
2,815,666	-		BT2246	0.39	+0.4
2,815,666	-		BT2246	0.39	-1.3
2,815,666	-		BT2246	0.39	+1.0
2,815,696	+		BT2246	0.41	-1.4
2,815,697	-		BT2246	0.41	-3.3
2,815,697	-		BT2246	0.41	-0.7
2,815,743	+		BT2246	0.43	-0.8