Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_0129

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
121,764	-		Ga0059261_0127	0.69	+0.4
121,911	-		Ga0059261_0127	0.88	-0.1
121,919	+		Ga0059261_0127	0.89	+0.1
121,919	+		Ga0059261_0127	0.89	-0.8
121,919	+		Ga0059261_0127	0.89	+0.1
121,919	+		Ga0059261_0127	0.89	+0.5
121,919	+		Ga0059261_0127	0.89	-0.1
121,919	+		Ga0059261_0127	0.89	+0.7
121,919	+		Ga0059261_0127	0.89	-1.4
121,920	-				+0.5
121,920	-		Ga0059261_0127	0.89	-0.3
121,920	-		Ga0059261_0127	0.89	-0.3
121,920	-		Ga0059261_0127	0.89	-0.5
121,929	+				-0.5
121,929	+				+0.3
121,929	+				+0.3
121,929	+				-0.2
121,930	-				+1.0
121,931	+				+1.5
121,931	+				+0.7
121,931	+				+0.2
121,931	+				+0.1
121,931	+				+1.0
121,931	+				-0.8
121,931	+				-0.8
121,931	+				+0.0
121,932	-				+0.3
121,932	-				-0.5
121,932	-				+0.5
121,932	-				-0.2
121,932	-				-0.5
122,138	+		Ga0059261_0128	0.23	+0.7
122,138	+		Ga0059261_0128	0.23	-0.0
122,138	+		Ga0059261_0128	0.23	-0.1
122,138	+		Ga0059261_0128	0.23	+0.2
122,138	+		Ga0059261_0128	0.23	+1.2
122,138	+		Ga0059261_0128	0.23	-0.2
122,139	-		Ga0059261_0128	0.23	+0.3
122,139	-		Ga0059261_0128	0.23	+0.7
122,139	-				+1.5
122,139	-		Ga0059261_0128	0.23	-0.5
122,139	-		Ga0059261_0128	0.23	+0.2
122,139	-		Ga0059261_0128	0.23	-0.7
122,139	-		Ga0059261_0128	0.23	+0.1
122,139	-		Ga0059261_0128	0.23	-0.1
122,139	-		Ga0059261_0128	0.23	-1.0
122,139	-		Ga0059261_0128	0.23	-0.7
122,378	+		Ga0059261_0128	0.61	-0.5
122,378	+		Ga0059261_0128	0.61	+0.4
122,379	-		Ga0059261_0128	0.62	-0.1
122,379	-		Ga0059261_0128	0.62	-0.2
122,379	-		Ga0059261_0128	0.62	-0.9
122,379	-		Ga0059261_0128	0.62	-0.1
122,565	+				+0.5
122,616	-				-2.6
122,616	-				-0.2
122,620	+				-1.1
122,621	-				+0.2
122,623	-				+0.5
122,623	-				-0.2
122,759	+		Ga0059261_0129	0.15	-2.5
122,759	+		Ga0059261_0129	0.15	+0.4
122,759	+		Ga0059261_0129	0.15	-0.4
122,760	-		Ga0059261_0129	0.15	+0.1
122,791	-		Ga0059261_0129	0.19	-0.9
122,808	+		Ga0059261_0129	0.21	+0.2
122,809	-		Ga0059261_0129	0.21	+0.6
122,809	-		Ga0059261_0129	0.21	+0.5
122,809	-		Ga0059261_0129	0.21	+0.6
122,809	-		Ga0059261_0129	0.21	-0.6
122,809	-		Ga0059261_0129	0.21	-0.5
122,809	-		Ga0059261_0129	0.21	+1.2
122,809	-		Ga0059261_0129	0.21	-0.1
122,809	-		Ga0059261_0129	0.21	-0.1
122,981	+		Ga0059261_0129	0.43	-0.1
122,981	+		Ga0059261_0129	0.43	-0.1
122,981	+		Ga0059261_0129	0.43	-0.1
122,981	+		Ga0059261_0129	0.43	+0.0
122,981	+		Ga0059261_0129	0.43	-1.1
122,981	+		Ga0059261_0129	0.43	+0.3
122,982	-		Ga0059261_0129	0.43	+0.3
122,982	-				+0.2
123,429	+				+0.5
123,429	+				+0.4
123,430	-				-0.1
123,430	-				-0.4
123,467	+				-0.9
123,508	+				-1.1
123,508	+				+0.1
123,508	+				-0.4
123,508	+				+0.8
123,508	+				-0.2
123,508	+				+0.7
123,508	+				+1.9
123,508	+				-0.5
123,508	+				+0.1
123,508	+				-0.6
123,508	+				-0.8
123,509	-				-0.6
123,509	-				-0.3
123,509	-				-0.1
123,553	+		Ga0059261_0130	0.14	-0.6
123,553	+		Ga0059261_0130	0.14	+0.1
123,553	+		Ga0059261_0130	0.14	+0.6
123,554	-		Ga0059261_0130	0.14	+0.2
123,554	-		Ga0059261_0130	0.14	+0.1
123,554	-		Ga0059261_0130	0.14	-0.1
123,554	-		Ga0059261_0130	0.14	+0.3
123,616	+		Ga0059261_0130	0.30	-1.7
123,617	-		Ga0059261_0130	0.30	+0.7
123,808	+		Ga0059261_0130	0.79	+0.2
123,808	+		Ga0059261_0130	0.79	+0.2
123,808	+		Ga0059261_0130	0.79	+1.4
123,808	+		Ga0059261_0130	0.79	+0.3
123,808	+		Ga0059261_0130	0.79	+0.4
123,808	+		Ga0059261_0130	0.79	-4.6
123,808	+		Ga0059261_0130	0.79	+0.3
123,809	-		Ga0059261_0130	0.79	+0.1
123,809	-		Ga0059261_0130	0.79	-0.4
123,809	-		Ga0059261_0130	0.79	+0.4
123,823	+		Ga0059261_0130	0.83	+0.5
123,823	+		Ga0059261_0130	0.83	+1.2
123,823	+		Ga0059261_0130	0.83	+1.1
123,823	+				+1.5
123,824	-				-1.1
123,824	-		Ga0059261_0130	0.83	-0.8
123,832	+		Ga0059261_0130	0.85	+1.2
123,832	+		Ga0059261_0130	0.85	-0.1
123,832	+		Ga0059261_0130	0.85	+0.1
123,832	+		Ga0059261_0130	0.85	-1.7
123,832	+		Ga0059261_0130	0.85	+0.5
123,832	+				-0.8
123,832	+		Ga0059261_0130	0.85	+0.2
123,832	+		Ga0059261_0130	0.85	+0.2
123,833	-		Ga0059261_0130	0.86	+0.6
123,833	-		Ga0059261_0130	0.86	-0.4
123,833	-		Ga0059261_0130	0.86	+0.4
123,886	+				-0.3
123,887	-				-0.6
123,887	-				+2.8
123,887	-				-1.7
123,912	+				-1.4
123,934	+		Ga0059261_0131	0.14	+2.7
123,934	+		Ga0059261_0131	0.14	+2.6
123,934	+		Ga0059261_0131	0.14	+2.9
123,934	+		Ga0059261_0131	0.14	+3.0
123,935	-		Ga0059261_0131	0.14	+2.9
123,935	-		Ga0059261_0131	0.14	+2.8
123,935	-		Ga0059261_0131	0.14	+3.0
124,081	+		Ga0059261_0131	0.56	+2.6
124,102	+		Ga0059261_0131	0.62	+1.4
124,102	+		Ga0059261_0131	0.62	+2.6
124,103	-		Ga0059261_0131	0.63	+0.9
124,109	+		Ga0059261_0131	0.64	+3.5
124,109	+		Ga0059261_0131	0.64	+1.6
124,109	+		Ga0059261_0131	0.64	+3.0
124,141	+		Ga0059261_0131	0.74	+2.3
124,142	-		Ga0059261_0131	0.74	+3.1
124,238	+				+2.6
124,238	+				+2.6
124,239	-				+2.8
124,239	-				+2.3
124,239	-				+2.4
124,239	-				+1.9
124,239	-				+1.9
124,250	+				+2.8
124,313	+				+1.6
124,313	+				+1.6
124,314	-				-0.4
124,314	-				+0.5
124,314	-				-0.7
124,314	-				+1.1
124,404	+		Ga0059261_0132	0.14	-0.6
124,404	+		Ga0059261_0132	0.14	+1.5
124,404	+		Ga0059261_0132	0.14	+0.3
124,404	+				+1.5
124,404	+		Ga0059261_0132	0.14	+1.1
124,405	-		Ga0059261_0132	0.14	+0.5
124,405	-		Ga0059261_0132	0.14	+1.2
124,405	-		Ga0059261_0132	0.14	+0.0
124,405	-		Ga0059261_0132	0.14	+1.0
124,405	-		Ga0059261_0132	0.14	+0.2
124,405	-		Ga0059261_0132	0.14	+0.5