Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23320 and AZOBR_RS23325 are separated by 466 nucleotides AZOBR_RS23325 and AZOBR_RS23330 are separated by 610 nucleotides
AZOBR_RS23320: AZOBR_RS23320 - C4-dicarboxylate ABC transporter permease, at 256,912 to 258,414
_RS23320
AZOBR_RS23325: AZOBR_RS23325 - RNA polymerase sigma70, at 258,881 to 259,414
_RS23325
AZOBR_RS23330: AZOBR_RS23330 - hypothetical protein, at 260,025 to 262,013
_RS23330
Position (kb) 258
259
260 Strain fitness (log2 ratio) -1
0
1 at 257.977 kb on + strand, within AZOBR_RS23320 at 257.978 kb on - strand, within AZOBR_RS23320 at 258.080 kb on - strand, within AZOBR_RS23320 at 258.182 kb on - strand, within AZOBR_RS23320 at 258.496 kb on + strand at 258.830 kb on - strand at 259.227 kb on + strand, within AZOBR_RS23325 at 259.785 kb on + strand at 259.786 kb on - strand at 259.904 kb on + strand at 260.154 kb on + strand at 260.184 kb on + strand at 260.184 kb on + strand at 260.185 kb on - strand at 260.244 kb on + strand, within AZOBR_RS23330 at 260.244 kb on + strand, within AZOBR_RS23330 at 260.253 kb on + strand, within AZOBR_RS23330 at 260.254 kb on - strand, within AZOBR_RS23330 at 260.265 kb on + strand, within AZOBR_RS23330 at 260.265 kb on + strand, within AZOBR_RS23330 at 260.265 kb on + strand, within AZOBR_RS23330 at 260.322 kb on + strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330 at 260.323 kb on - strand, within AZOBR_RS23330
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 257,977 + AZOBR_RS23320 0.71 -0.0 257,978 - AZOBR_RS23320 0.71 -0.5 258,080 - AZOBR_RS23320 0.78 -0.6 258,182 - AZOBR_RS23320 0.84 +0.1 258,496 + +0.1 258,830 - -0.2 259,227 + AZOBR_RS23325 0.65 +0.3 259,785 + +1.2 259,786 - +0.0 259,904 + +0.1 260,154 + +0.3 260,184 + -0.3 260,184 + +0.8 260,185 - -0.4 260,244 + AZOBR_RS23330 0.11 +0.1 260,244 + AZOBR_RS23330 0.11 +0.0 260,253 + AZOBR_RS23330 0.11 +0.6 260,254 - AZOBR_RS23330 0.12 +0.2 260,265 + AZOBR_RS23330 0.12 -0.3 260,265 + AZOBR_RS23330 0.12 +1.0 260,265 + AZOBR_RS23330 0.12 +0.0 260,322 + AZOBR_RS23330 0.15 +1.3 260,323 - AZOBR_RS23330 0.15 +0.0 260,323 - AZOBR_RS23330 0.15 +0.5 260,323 - AZOBR_RS23330 0.15 +0.9 260,323 - AZOBR_RS23330 0.15 +0.3 260,323 - AZOBR_RS23330 0.15 -0.2 260,323 - AZOBR_RS23330 0.15 -0.2 260,323 - AZOBR_RS23330 0.15 +1.1
Or see this region's nucleotide sequence