Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19620

Experiment: Chloramphenicol 0.0025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0025 mg/ml
4,299,100	+		AO353_19615	0.14	+0.9
4,299,100	+		AO353_19615	0.14	-0.6
4,299,100	+		AO353_19615	0.14	+0.0
4,299,149	+		AO353_19615	0.19	+0.3
4,299,153	-		AO353_19615	0.19	-0.1
4,299,173	+		AO353_19615	0.21	+0.4
4,299,173	+		AO353_19615	0.21	-1.7
4,299,173	+		AO353_19615	0.21	+0.0
4,299,174	-		AO353_19615	0.21	-0.9
4,299,174	-		AO353_19615	0.21	-1.0
4,299,174	-		AO353_19615	0.21	-0.4
4,299,174	-		AO353_19615	0.21	-0.4
4,299,182	-		AO353_19615	0.22	-0.9
4,299,182	-		AO353_19615	0.22	+1.9
4,299,205	+		AO353_19615	0.24	+1.3
4,299,205	+		AO353_19615	0.24	-1.0
4,299,205	+		AO353_19615	0.24	-0.3
4,299,256	+		AO353_19615	0.28	+0.0
4,299,256	+		AO353_19615	0.28	-2.0
4,299,257	-		AO353_19615	0.28	-1.2
4,299,257	-		AO353_19615	0.28	-0.8
4,299,260	+		AO353_19615	0.29	+1.0
4,299,260	+		AO353_19615	0.29	+0.3
4,299,264	+		AO353_19615	0.29	+0.4
4,299,265	-		AO353_19615	0.29	-1.5
4,299,288	-		AO353_19615	0.31	-0.9
4,299,293	+		AO353_19615	0.32	+0.9
4,299,293	+		AO353_19615	0.32	+0.8
4,299,293	+		AO353_19615	0.32	+0.7
4,299,362	+		AO353_19615	0.38	-0.0
4,299,362	+		AO353_19615	0.38	+0.5
4,299,363	-		AO353_19615	0.38	-0.4
4,299,369	-		AO353_19615	0.38	-1.8
4,299,386	-		AO353_19615	0.40	-0.1
4,299,437	+		AO353_19615	0.45	-1.2
4,299,451	+		AO353_19615	0.46	-0.1
4,299,452	-		AO353_19615	0.46	-0.5
4,299,452	-		AO353_19615	0.46	-0.3
4,299,452	-		AO353_19615	0.46	+0.7
4,299,453	+		AO353_19615	0.46	-1.8
4,299,453	+		AO353_19615	0.46	-0.7
4,299,454	-		AO353_19615	0.46	+0.2
4,299,454	-		AO353_19615	0.46	+0.6
4,299,454	-		AO353_19615	0.46	-0.4
4,299,454	-		AO353_19615	0.46	-0.3
4,299,457	+		AO353_19615	0.46	+0.3
4,299,457	+		AO353_19615	0.46	+0.0
4,299,458	-		AO353_19615	0.46	+0.1
4,299,458	-		AO353_19615	0.46	-1.2
4,299,509	+		AO353_19615	0.51	+0.2
4,299,509	+		AO353_19615	0.51	-1.2
4,299,510	-		AO353_19615	0.51	-1.3
4,299,510	-		AO353_19615	0.51	-0.3
4,299,510	-				+0.0
4,299,513	+		AO353_19615	0.51	-0.1
4,299,514	-		AO353_19615	0.51	-0.4
4,299,514	-		AO353_19615	0.51	-0.4
4,299,514	-		AO353_19615	0.51	-0.1
4,299,514	-		AO353_19615	0.51	+0.6
4,299,514	-		AO353_19615	0.51	+0.5
4,299,514	-		AO353_19615	0.51	-0.1
4,299,527	+		AO353_19615	0.53	-0.5
4,299,528	-		AO353_19615	0.53	-1.1
4,299,546	+		AO353_19615	0.54	-0.4
4,299,550	+		AO353_19615	0.55	-1.0
4,299,550	+		AO353_19615	0.55	+1.6
4,299,551	-		AO353_19615	0.55	+0.9
4,299,551	-		AO353_19615	0.55	+0.2
4,299,553	+		AO353_19615	0.55	-1.2
4,299,554	-		AO353_19615	0.55	+0.5
4,299,581	+		AO353_19615	0.58	-0.6
4,299,581	+		AO353_19615	0.58	-0.1
4,299,581	+		AO353_19615	0.58	+0.9
4,299,582	-		AO353_19615	0.58	-0.5
4,299,582	-		AO353_19615	0.58	+1.2
4,299,582	-		AO353_19615	0.58	-0.2
4,299,599	-		AO353_19615	0.59	-1.2
4,299,629	+		AO353_19615	0.62	+0.3
4,299,629	+		AO353_19615	0.62	+0.6
4,299,629	+		AO353_19615	0.62	-0.3
4,299,629	+		AO353_19615	0.62	-0.2
4,299,629	+		AO353_19615	0.62	+0.1
4,299,629	+		AO353_19615	0.62	+0.2
4,299,630	-		AO353_19615	0.62	+0.3
4,299,630	-		AO353_19615	0.62	-0.2
4,299,630	-		AO353_19615	0.62	+0.4
4,299,630	-		AO353_19615	0.62	-0.7
4,299,630	-		AO353_19615	0.62	+0.9
4,299,634	-		AO353_19615	0.62	-1.9
4,299,634	-		AO353_19615	0.62	+1.0
4,299,634	-		AO353_19615	0.62	-0.4
4,299,634	-		AO353_19615	0.62	-1.4
4,299,806	-		AO353_19615	0.78	-1.9
4,299,855	-		AO353_19615	0.82	+0.5
4,299,895	-		AO353_19615	0.86	+0.5
4,299,909	+		AO353_19615	0.87	-0.7
4,299,909	+		AO353_19615	0.87	+0.5
4,299,921	-		AO353_19615	0.88	+0.2
4,299,941	+		AO353_19615	0.90	-0.1
4,299,941	+		AO353_19615	0.90	-0.4
4,299,942	-				+1.0
4,299,973	-				-0.8
4,299,986	-				+0.2
4,300,053	+				-0.7
4,300,054	-				+0.5
4,300,054	-				-0.4
4,300,055	+				-0.1
4,300,055	+				+0.1
4,300,055	+				+0.5
4,300,055	+				+0.6
4,300,056	-				-0.5
4,300,056	-				+1.0
4,300,056	-				+0.3
4,300,108	+				+0.6
4,300,108	+				-0.3
4,300,108	+				+1.2
4,300,109	-				+0.3
4,300,109	-				-0.1
4,300,110	+				+0.4
4,300,111	-				+0.4
4,300,111	-				+0.4
4,300,129	+				-0.7
4,300,323	+		AO353_19620	0.26	+1.4
4,300,324	-		AO353_19620	0.26	-1.0
4,300,324	-		AO353_19620	0.26	+0.2
4,300,324	-		AO353_19620	0.26	+0.6
4,300,324	-		AO353_19620	0.26	+0.2
4,300,386	+		AO353_19620	0.32	+0.6
4,300,386	+		AO353_19620	0.32	+2.2
4,300,386	+		AO353_19620	0.32	+0.9
4,300,386	+		AO353_19620	0.32	+1.2
4,300,386	+		AO353_19620	0.32	-1.1
4,300,386	+		AO353_19620	0.32	+0.6
4,300,386	+		AO353_19620	0.32	-1.0
4,300,387	-				+0.6
4,300,387	-		AO353_19620	0.32	+1.0
4,300,387	-		AO353_19620	0.32	-0.7
4,300,387	-		AO353_19620	0.32	-1.2
4,300,387	-				+0.0
4,300,387	-		AO353_19620	0.32	+0.7
4,300,387	-		AO353_19620	0.32	+0.0
4,300,387	-		AO353_19620	0.32	+0.0
4,300,387	-		AO353_19620	0.32	+1.3
4,300,407	+		AO353_19620	0.35	-1.4
4,300,407	+		AO353_19620	0.35	+0.8
4,300,407	+		AO353_19620	0.35	-0.6
4,300,407	+		AO353_19620	0.35	-0.7
4,300,407	+		AO353_19620	0.35	-0.5
4,300,407	+		AO353_19620	0.35	+0.2
4,300,407	+		AO353_19620	0.35	-0.7
4,300,408	-		AO353_19620	0.35	+1.6
4,300,408	-		AO353_19620	0.35	-0.1
4,300,408	-		AO353_19620	0.35	+0.6
4,300,408	-		AO353_19620	0.35	+0.2
4,300,480	-		AO353_19620	0.42	+1.8
4,300,530	+		AO353_19620	0.47	+1.6
4,300,530	+		AO353_19620	0.47	+0.0
4,300,530	+		AO353_19620	0.47	+1.0
4,300,531	-		AO353_19620	0.48	+0.8
4,300,531	-		AO353_19620	0.48	+0.9
4,300,581	+		AO353_19620	0.53	+1.0
4,300,581	+		AO353_19620	0.53	+1.0
4,300,581	+		AO353_19620	0.53	-0.6
4,300,581	+		AO353_19620	0.53	+0.7
4,300,581	+		AO353_19620	0.53	-0.5
4,300,582	-		AO353_19620	0.53	+0.4
4,300,582	-		AO353_19620	0.53	+0.2
4,300,582	-		AO353_19620	0.53	+0.7
4,300,582	-		AO353_19620	0.53	-0.0
4,300,582	-		AO353_19620	0.53	+0.8
4,300,582	-		AO353_19620	0.53	-0.7
4,300,701	+		AO353_19620	0.65	+1.4
4,300,701	+		AO353_19620	0.65	+0.5
4,300,702	-		AO353_19620	0.65	+0.3
4,300,702	-		AO353_19620	0.65	+0.6
4,300,713	+		AO353_19620	0.67	-0.4
4,300,713	+		AO353_19620	0.67	+1.6
4,300,713	+		AO353_19620	0.67	-1.0
4,300,713	+		AO353_19620	0.67	-0.7
4,300,713	+		AO353_19620	0.67	-0.2
4,300,713	+		AO353_19620	0.67	+0.0
4,300,714	-		AO353_19620	0.67	+0.0
4,300,714	-		AO353_19620	0.67	-0.7
4,300,714	-		AO353_19620	0.67	-0.6
4,300,714	-		AO353_19620	0.67	+0.9
4,300,803	+		AO353_19620	0.76	+0.0
4,300,803	+		AO353_19620	0.76	+0.9
4,300,857	+		AO353_19620	0.82	-0.8
4,300,858	-		AO353_19620	0.82	+0.5
4,300,858	-		AO353_19620	0.82	-0.6
4,300,881	+		AO353_19620	0.84	-0.8
4,300,881	+		AO353_19620	0.84	+0.8
4,300,881	+		AO353_19620	0.84	-0.1
4,300,881	+		AO353_19620	0.84	+0.5
4,300,881	+		AO353_19620	0.84	-1.3
4,300,881	+		AO353_19620	0.84	+0.0
4,300,881	+		AO353_19620	0.84	-1.0
4,300,881	+		AO353_19620	0.84	-0.2
4,300,881	+		AO353_19620	0.84	-0.9
4,300,882	-		AO353_19620	0.84	-1.2
4,300,882	-		AO353_19620	0.84	+1.2
4,300,882	-		AO353_19620	0.84	-2.5
4,300,882	-		AO353_19620	0.84	+0.2
4,300,882	-		AO353_19620	0.84	+0.5
4,300,882	-		AO353_19620	0.84	+0.5
4,300,882	-		AO353_19620	0.84	+1.2
4,300,882	-		AO353_19620	0.84	-1.0
4,300,882	-		AO353_19620	0.84	-2.0
4,300,882	-		AO353_19620	0.84	+1.1
4,300,882	-		AO353_19620	0.84	-0.1
4,300,882	-		AO353_19620	0.84	+2.0
4,300,923	+		AO353_19620	0.89	+1.0
4,300,923	+		AO353_19620	0.89	+0.6
4,300,924	-		AO353_19620	0.89	-0.7
4,300,929	+		AO353_19620	0.89	-0.4
4,300,929	+		AO353_19620	0.89	+1.3
4,300,929	+		AO353_19620	0.89	+0.8
4,300,929	+		AO353_19620	0.89	-0.7
4,300,929	+		AO353_19620	0.89	+0.5
4,300,929	+		AO353_19620	0.89	+0.3
4,300,929	+		AO353_19620	0.89	+0.5
4,300,929	+		AO353_19620	0.89	-0.6
4,300,929	+		AO353_19620	0.89	-1.2
4,300,930	-		AO353_19620	0.89	+0.2
4,300,930	-		AO353_19620	0.89	-0.3
4,300,930	-		AO353_19620	0.89	-0.5
4,300,930	-		AO353_19620	0.89	+0.5
4,300,930	-		AO353_19620	0.89	-0.9
4,300,947	+				+2.9
4,300,947	+				+0.4
4,300,948	-				-0.5
4,300,948	-				+0.0
4,300,948	-				-0.3
4,300,948	-				-1.1
4,301,052	+				-1.1
4,301,052	+				-0.3
4,301,053	-				+0.2
4,301,053	-				+1.6
4,301,053	-				+0.3
4,301,053	-				-0.7
4,301,280	+		AO353_19625	0.38	+0.6
4,301,280	+		AO353_19625	0.38	+0.6
4,301,280	+		AO353_19625	0.38	+0.6
4,301,281	-		AO353_19625	0.38	+0.2
4,301,281	-		AO353_19625	0.38	+2.6
4,301,281	-		AO353_19625	0.38	-0.7
4,301,281	-				+1.0
4,301,457	+		AO353_19625	0.71	-1.6
4,301,458	-		AO353_19625	0.71	-0.4
4,301,486	+		AO353_19625	0.76	+0.2
4,301,487	-		AO353_19625	0.76	+0.5
4,301,531	+		AO353_19625	0.84	+0.4
4,301,600	+				+0.6
4,301,812	+				+0.0
4,301,832	+				-0.1
4,301,836	+				+0.3
4,301,840	+				-0.4
4,301,840	+				-0.6
4,301,840	+				-1.3
4,301,970	+				+0.5
4,301,971	-				-1.3
4,302,022	-				-1.1