Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12245

Experiment: Chloramphenicol 0.0025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0025 mg/ml
2,691,471	+				-0.7
2,691,471	+				-0.7
2,691,471	+				-1.0
2,691,471	+				+0.9
2,691,471	+				+1.8
2,691,471	+				+0.7
2,691,472	-				-0.6
2,691,472	-				+1.0
2,691,472	-				-1.3
2,691,472	-				-1.7
2,691,472	-				-1.3
2,691,472	-				+0.7
2,691,472	-				+1.1
2,691,472	-				-0.7
2,691,472	-				-0.9
2,691,472	-				-0.1
2,691,472	-				-0.4
2,691,472	-				-0.5
2,691,492	-				+0.2
2,691,550	+				-0.1
2,691,556	+				+0.8
2,691,557	-				+2.0
2,691,557	-				+0.3
2,691,557	-				-0.4
2,691,559	-				-0.3
2,691,560	+				+0.7
2,691,560	+				+0.7
2,691,560	+				-1.0
2,691,560	+				-0.2
2,691,560	+				+0.5
2,691,560	+				-1.4
2,691,560	+				-0.3
2,691,560	+				+0.6
2,691,560	+				-1.2
2,691,560	+				-0.5
2,691,561	-				+0.7
2,691,561	-				+0.4
2,691,561	-				-0.1
2,691,561	-				+0.1
2,691,561	-				-0.1
2,691,561	-				+0.1
2,691,564	+				-0.1
2,691,564	+				+1.4
2,691,565	-				+0.4
2,691,565	-				+0.5
2,691,565	-				-1.6
2,691,565	-				+1.7
2,691,567	-				-0.7
2,691,602	+				+0.6
2,691,602	+				-1.1
2,691,603	-				-0.7
2,691,650	+				-0.3
2,691,650	+				+1.5
2,691,650	+				+1.1
2,691,651	-				+0.7
2,691,651	-				-0.9
2,691,651	-				-0.3
2,691,697	+				-0.5
2,691,697	+				-0.4
2,691,697	+				-0.1
2,691,697	+				-1.1
2,691,697	+				-1.3
2,691,698	-				-0.5
2,691,698	-				-0.5
2,691,698	-				-0.2
2,691,698	-				-1.5
2,691,698	-				+0.2
2,691,698	-				-0.9
2,691,698	-				+0.3
2,691,698	-				-0.9
2,691,698	-				-0.4
2,691,757	+		AO353_12240	0.16	-0.1
2,691,758	-		AO353_12240	0.17	-1.2
2,691,924	+		AO353_12240	0.39	+1.9
2,691,925	-		AO353_12240	0.39	+1.6
2,691,925	-		AO353_12240	0.39	-0.8
2,691,925	-		AO353_12240	0.39	+0.1
2,691,978	+		AO353_12240	0.46	+1.5
2,691,978	+		AO353_12240	0.46	-0.5
2,691,978	+		AO353_12240	0.46	+1.3
2,691,978	+		AO353_12240	0.46	+0.1
2,691,978	+		AO353_12240	0.46	-0.0
2,691,978	+		AO353_12240	0.46	-0.5
2,691,978	+		AO353_12240	0.46	-0.7
2,691,978	+		AO353_12240	0.46	+1.0
2,691,979	-		AO353_12240	0.46	+1.4
2,691,979	-		AO353_12240	0.46	+0.4
2,691,979	-		AO353_12240	0.46	+0.1
2,692,133	-		AO353_12240	0.67	+0.7
2,692,165	+		AO353_12240	0.71	+0.7
2,692,166	-		AO353_12240	0.71	+0.9
2,692,166	-		AO353_12240	0.71	+1.5
2,692,171	+		AO353_12240	0.72	-0.5
2,692,171	+		AO353_12240	0.72	+1.1
2,692,171	+		AO353_12240	0.72	+0.1
2,692,171	+		AO353_12240	0.72	+0.6
2,692,172	-		AO353_12240	0.72	-1.0
2,692,381	+				+0.1
2,692,381	+				-0.6
2,692,381	+				-0.5
2,692,381	+				+0.8
2,692,381	+				+0.4
2,692,382	-				+0.3
2,692,382	-				-0.3
2,692,382	-				-0.7
2,692,382	-				+0.0
2,692,382	-				+0.7
2,692,382	-				+0.5
2,692,382	-				-1.3
2,692,395	+				+0.0
2,692,395	+				+0.4
2,692,396	-				-0.8
2,692,396	-				+0.7
2,692,396	-				-1.3
2,692,405	+				-0.8
2,692,405	+				-0.3
2,692,405	+				+0.7
2,692,405	+				-0.5
2,692,405	+				-0.4
2,692,405	+				-0.2
2,692,405	+				+0.6
2,692,405	+				-0.5
2,692,405	+				-0.1
2,692,405	+				-1.4
2,692,405	+				+2.3
2,692,405	+				+0.6
2,692,405	+				-1.6
2,692,405	+				+0.6
2,692,405	+				-0.2
2,692,406	-				-0.3
2,692,406	-				-0.2
2,692,406	-				-0.3
2,692,406	-				-0.1
2,692,406	-				+1.3
2,692,406	-				+0.2
2,692,406	-				-0.9
2,692,406	-				-0.7
2,692,406	-				-0.9
2,692,406	-				+0.6
2,692,406	-				-0.0
2,692,406	-				+0.3
2,692,406	-				+0.3
2,692,406	-				-1.1
2,692,406	-				-0.9
2,692,406	-				-0.9
2,692,406	-				-0.2
2,692,406	-				+0.1
2,692,406	-				-0.5
2,692,406	-				+1.1
2,692,406	-				+0.7
2,692,406	-				+0.0
2,692,406	-				+0.5
2,692,406	-				+1.3
2,692,406	-				-1.0
2,692,441	+				-0.1
2,692,442	-				-2.7
2,692,442	-				+1.0
2,692,582	+		AO353_12245	0.30	+0.0
2,692,582	+		AO353_12245	0.30	-1.1
2,692,583	-		AO353_12245	0.31	-0.9
2,692,744	+		AO353_12245	0.59	-1.2
2,692,744	+		AO353_12245	0.59	-2.2
2,692,744	+		AO353_12245	0.59	-0.5
2,692,744	+		AO353_12245	0.59	-0.1
2,692,745	-		AO353_12245	0.59	-0.7
2,692,745	-		AO353_12245	0.59	+0.1
2,692,987	+				+0.4
2,692,988	-				-0.1
2,693,061	+				+0.4
2,693,061	+				-0.2
2,693,062	-				+0.1
2,693,062	-				-2.3
2,693,075	+				-1.1
2,693,075	+				-1.6
2,693,101	+				+0.8
2,693,227	+				+0.8
2,693,227	+				-1.6
2,693,227	+				-0.2
2,693,228	-				-0.4
2,693,228	-				+0.3
2,693,361	-				-0.2
2,693,361	-				-0.2
2,693,361	-				-0.3
2,693,368	+				+0.8
2,693,368	+				-0.1
2,693,368	+				-0.5
2,693,369	-				-1.5
2,693,369	-				+0.1
2,693,369	-				-0.2
2,693,386	+				-0.1
2,693,386	+				+0.0
2,693,386	+				+0.2
2,693,387	-				-1.1
2,693,392	+				+0.3
2,693,392	+				-0.3
2,693,392	+				+1.7
2,693,392	+				+0.2
2,693,393	-				+0.8
2,693,393	-				-1.3
2,693,547	+				-0.4
2,693,547	+				+0.5
2,693,547	+				-1.3
2,693,548	-				+1.3
2,693,548	-				+0.1
2,693,550	+				-1.1
2,693,550	+				+0.2
2,693,550	+				+0.1
2,693,550	+				+0.3
2,693,550	+				+1.1
2,693,550	+				+0.3
2,693,550	+				+0.0
2,693,551	-				-0.1
2,693,551	-				-0.4
2,693,690	-		AO353_12250	0.11	+0.8
2,693,729	-		AO353_12250	0.13	-0.5
2,693,920	+		AO353_12250	0.24	-0.3
2,693,920	+		AO353_12250	0.24	-1.0
2,693,920	+		AO353_12250	0.24	-0.9
2,693,920	+		AO353_12250	0.24	-1.1
2,693,921	-		AO353_12250	0.24	-0.0
2,693,921	-		AO353_12250	0.24	+1.5
2,693,921	-		AO353_12250	0.24	+0.6
2,693,921	-		AO353_12250	0.24	+1.0
2,693,950	+		AO353_12250	0.26	+1.0
2,693,950	+		AO353_12250	0.26	-0.6
2,693,950	+		AO353_12250	0.26	+0.7
2,693,950	+		AO353_12250	0.26	+1.7
2,693,951	-		AO353_12250	0.26	+0.4
2,693,951	-		AO353_12250	0.26	+0.5
2,693,951	-		AO353_12250	0.26	-0.1
2,693,951	-		AO353_12250	0.26	-0.2