Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05130

Experiment: Chloramphenicol 0.0025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0025 mg/ml
1,132,371	-		AO353_05125	0.17	-1.8
1,132,421	-		AO353_05125	0.37	+0.6
1,132,421	-		AO353_05125	0.37	-0.0
1,132,421	-		AO353_05125	0.37	-0.5
1,132,421	-		AO353_05125	0.37	-1.9
1,132,421	-		AO353_05125	0.37	+0.5
1,132,421	-		AO353_05125	0.37	+0.3
1,132,421	-		AO353_05125	0.37	+1.0
1,132,421	-		AO353_05125	0.37	-1.5
1,132,421	-		AO353_05125	0.37	+1.7
1,132,513	-		AO353_05125	0.73	-0.3
1,132,513	-		AO353_05125	0.73	-0.2
1,132,525	-		AO353_05125	0.78	+0.4
1,132,525	-		AO353_05125	0.78	-0.8
1,132,525	-		AO353_05125	0.78	+0.3
1,132,625	-				-1.6
1,132,625	-				+1.0
1,132,625	-				-0.6
1,132,625	-				+0.3
1,132,656	+				-0.3
1,132,657	-				-0.7
1,132,683	+				+1.0
1,132,683	+				-0.5
1,132,683	+				-1.1
1,132,684	-				-1.2
1,132,684	-				+0.5
1,132,684	-				-0.3
1,132,684	-				+0.4
1,132,685	+				-0.2
1,132,685	+				-1.3
1,132,685	+				-0.3
1,132,685	+				-0.6
1,132,685	+				+0.1
1,132,685	+				-0.3
1,132,685	+				-0.6
1,132,685	+				-0.3
1,132,685	+				-0.3
1,132,685	+				-0.9
1,132,685	+				-0.7
1,132,685	+				-1.2
1,132,686	-				-0.8
1,132,686	-				-0.2
1,132,686	-				+0.8
1,132,686	-				+0.7
1,132,686	-				+1.0
1,132,686	-				+0.7
1,132,686	-				-0.6
1,132,686	-				+0.4
1,132,686	-				+0.7
1,132,686	-				+1.0
1,132,692	+				-1.4
1,132,692	+				-1.3
1,132,692	+				-0.3
1,132,692	+				-1.8
1,132,692	+				-1.1
1,132,692	+				-0.0
1,132,692	+				-1.3
1,132,692	+				+0.1
1,132,692	+				-0.9
1,132,692	+				-2.4
1,132,692	+				-0.1
1,132,692	+				+1.7
1,132,692	+				-1.8
1,132,692	+				+0.6
1,132,692	+				+0.2
1,132,692	+				-1.0
1,132,692	+				-0.6
1,132,692	+				-0.6
1,132,693	-				+1.0
1,132,693	-				-1.2
1,132,693	-				-0.6
1,132,693	-				+0.7
1,132,693	-				+1.2
1,132,693	-				-0.6
1,132,693	-				+0.4
1,132,693	-				-0.5
1,132,693	-				-0.8
1,132,693	-				-1.3
1,132,693	-				+0.7
1,132,693	-				+1.3
1,132,693	-				-0.7
1,132,693	-				+2.6
1,132,693	-				-1.0
1,132,696	+				-1.7
1,132,696	+				-0.2
1,132,696	+				-1.5
1,132,696	+				-1.3
1,132,697	-				-0.0
1,132,697	-				+0.7
1,132,697	-				-0.5
1,132,697	-				+0.5
1,132,697	-				+1.0
1,132,866	+		AO353_05130	0.56	-1.3
1,132,866	+		AO353_05130	0.56	-0.6
1,132,866	+		AO353_05130	0.56	-1.3
1,132,867	-		AO353_05130	0.56	-1.2
1,133,129	+		AO353_05135	0.20	-0.3
1,133,170	+		AO353_05135	0.26	-0.3
1,133,208	+		AO353_05135	0.32	-0.7
1,133,209	-		AO353_05135	0.32	-1.6
1,133,209	-		AO353_05135	0.32	+0.7
1,133,209	-		AO353_05135	0.32	-0.0
1,133,209	-		AO353_05135	0.32	-0.5
1,133,220	+		AO353_05135	0.34	-2.1
1,133,220	+		AO353_05135	0.34	-1.2
1,133,220	+		AO353_05135	0.34	-0.7
1,133,220	+		AO353_05135	0.34	-1.9
1,133,220	+		AO353_05135	0.34	-1.0
1,133,220	+		AO353_05135	0.34	-0.5
1,133,220	+		AO353_05135	0.34	-0.0
1,133,220	+		AO353_05135	0.34	-0.3
1,133,220	+		AO353_05135	0.34	-0.8
1,133,220	+		AO353_05135	0.34	+0.3
1,133,221	-		AO353_05135	0.34	-0.7
1,133,221	-		AO353_05135	0.34	+0.8
1,133,221	-		AO353_05135	0.34	-1.9
1,133,221	-		AO353_05135	0.34	-1.5
1,133,221	-		AO353_05135	0.34	-1.2
1,133,221	-		AO353_05135	0.34	-1.8
1,133,221	-		AO353_05135	0.34	-1.9
1,133,221	-		AO353_05135	0.34	+0.4
1,133,299	+		AO353_05135	0.46	-0.3
1,133,300	-		AO353_05135	0.46	-1.5
1,133,316	+		AO353_05135	0.48	-1.7
1,133,316	+		AO353_05135	0.48	-1.0
1,133,316	+		AO353_05135	0.48	+0.2
1,133,317	-		AO353_05135	0.48	-0.2
1,133,317	-		AO353_05135	0.48	-1.0
1,133,317	-		AO353_05135	0.48	-1.2
1,133,317	-		AO353_05135	0.48	-0.0
1,133,337	+		AO353_05135	0.52	-0.2
1,133,338	-		AO353_05135	0.52	-2.1
1,133,338	-		AO353_05135	0.52	-1.0
1,133,338	-		AO353_05135	0.52	-0.3
1,133,338	-		AO353_05135	0.52	-1.9
1,133,365	+		AO353_05135	0.56	+0.4
1,133,365	+		AO353_05135	0.56	-1.2
1,133,409	+		AO353_05135	0.62	-2.8
1,133,409	+		AO353_05135	0.62	-1.6
1,133,410	-		AO353_05135	0.63	-0.5
1,133,410	-		AO353_05135	0.63	-2.2
1,133,484	+		AO353_05135	0.74	-1.0
1,133,485	-		AO353_05135	0.74	-0.9
1,133,485	-		AO353_05135	0.74	-0.3
1,133,508	+		AO353_05135	0.77	-0.0
1,133,508	+		AO353_05135	0.77	+0.7
1,133,508	+		AO353_05135	0.77	-0.9
1,133,508	+		AO353_05135	0.77	-2.0
1,133,509	-		AO353_05135	0.78	-2.0
1,133,509	-		AO353_05135	0.78	-1.3
1,133,509	-		AO353_05135	0.78	+0.2
1,133,509	-		AO353_05135	0.78	-0.8
1,133,518	+		AO353_05135	0.79	+0.4
1,133,518	+		AO353_05135	0.79	-0.3
1,133,669	+				-0.3
1,133,669	+				-1.9
1,133,669	+				-1.7
1,133,670	-				-0.3
1,133,670	-				+0.6
1,133,670	-				-0.3
1,133,670	-				+0.4
1,133,670	-				+0.2
1,133,691	+				-1.3
1,133,691	+				+0.4
1,133,707	-				-1.2
1,133,804	+		AO353_05140	0.29	-3.2
1,133,804	+		AO353_05140	0.29	-0.8
1,133,804	+		AO353_05140	0.29	-0.8
1,133,804	+		AO353_05140	0.29	-0.0
1,133,804	+		AO353_05140	0.29	-1.5
1,133,804	+		AO353_05140	0.29	-0.8
1,133,804	+		AO353_05140	0.29	+0.4
1,133,804	+		AO353_05140	0.29	-0.3
1,133,804	+		AO353_05140	0.29	-1.6
1,133,805	-		AO353_05140	0.29	-2.4
1,133,805	-		AO353_05140	0.29	-0.0
1,133,805	-		AO353_05140	0.29	-2.3
1,133,805	-		AO353_05140	0.29	+0.2
1,133,805	-		AO353_05140	0.29	-1.2
1,133,805	-		AO353_05140	0.29	-0.0
1,133,835	+		AO353_05140	0.36	-1.5
1,133,835	+		AO353_05140	0.36	+1.6
1,133,835	+		AO353_05140	0.36	-1.8
1,133,836	-		AO353_05140	0.36	-0.3
1,133,862	+		AO353_05140	0.41	-0.6
1,133,862	+		AO353_05140	0.41	-0.3
1,133,862	+		AO353_05140	0.41	-0.3
1,133,862	+				+2.0
1,133,862	+		AO353_05140	0.41	-1.7
1,133,863	-		AO353_05140	0.42	-1.9
1,133,863	-		AO353_05140	0.42	-3.4
1,133,866	+		AO353_05140	0.42	-0.8
1,133,991	+		AO353_05140	0.69	+0.4