Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1121

Experiment: Defined MoLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_1120 and DvMF_1121 are separated by 872 nucleotides DvMF_1120: DvMF_1120 - hypothetical protein (RefSeq), at 1,375,744 to 1,376,295 _1120 DvMF_1121: DvMF_1121 - hypothetical protein (RefSeq), at 1,377,168 to 1,377,749 _1121 Position (kb) 1377 1378Strain fitness (log2 ratio) -1 0 1at 1376.398 kb on - strandat 1376.656 kb on + strandat 1376.824 kb on + strandat 1377.060 kb on + strandat 1377.061 kb on + strandat 1377.254 kb on + strand, within DvMF_1121at 1377.477 kb on - strand, within DvMF_1121at 1377.667 kb on - strand, within DvMF_1121at 1377.977 kb on + strandat 1377.982 kb on + strandat 1378.000 kb on + strandat 1378.479 kb on + strandat 1378.704 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Defined MoLS4
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1,376,398 - +0.0
1,376,656 + +1.1
1,376,824 + -0.2
1,377,060 + +0.2
1,377,061 + -0.6
1,377,254 + DvMF_1121 0.15 -0.1
1,377,477 - DvMF_1121 0.53 +0.2
1,377,667 - DvMF_1121 0.86 -0.5
1,377,977 + -0.2
1,377,982 + -0.2
1,378,000 + +0.4
1,378,479 + +0.0
1,378,704 - -0.1

Or see this region's nucleotide sequence