Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4041

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
4,165,537	-				+0.1
4,165,537	-				-0.6
4,165,622	+				-3.0
4,165,772	-				+0.4
4,165,772	-				-0.1
4,165,789	-				+0.5
4,165,789	-				-0.0
4,165,797	+				-2.2
4,165,798	-				+0.2
4,165,848	+				-3.9
4,165,849	-				-4.2
4,165,849	-				-0.9
4,165,849	-				-3.2
4,165,880	+				-1.9
4,165,880	+				-2.5
4,165,880	+				-3.5
4,165,880	+				-3.5
4,165,880	+				-3.7
4,165,880	+				-0.6
4,165,881	-				-2.3
4,165,881	-				-0.6
4,165,881	-				-4.7
4,165,881	-				-0.3
4,165,934	+				-3.1
4,165,934	+				-1.6
4,165,935	-				-1.4
4,165,935	-				-2.0
4,165,935	-				-1.0
4,166,121	+		Ga0059261_4041	0.18	-2.9
4,166,178	+		Ga0059261_4041	0.21	-1.5
4,166,178	+		Ga0059261_4041	0.21	-0.3
4,166,474	+		Ga0059261_4041	0.37	-3.0
4,166,474	+		Ga0059261_4041	0.37	-1.7
4,166,475	-		Ga0059261_4041	0.37	-2.3
4,166,475	-		Ga0059261_4041	0.37	-4.0
4,166,475	-		Ga0059261_4041	0.37	-0.9
4,166,475	-		Ga0059261_4041	0.37	-2.4
4,166,636	+		Ga0059261_4041	0.45	-3.1
4,166,637	-		Ga0059261_4041	0.45	-1.9
4,166,637	-		Ga0059261_4041	0.45	-0.9
4,166,637	-		Ga0059261_4041	0.45	-2.1
4,166,637	-		Ga0059261_4041	0.45	-1.8
4,166,637	-		Ga0059261_4041	0.45	-2.3
4,166,816	+		Ga0059261_4041	0.54	-4.1
4,166,816	+		Ga0059261_4041	0.54	-3.0
4,166,816	+		Ga0059261_4041	0.54	-2.6
4,166,816	+		Ga0059261_4041	0.54	-3.4
4,166,816	+		Ga0059261_4041	0.54	-1.9
4,166,817	-		Ga0059261_4041	0.54	-2.7
4,166,817	-		Ga0059261_4041	0.54	-4.2
4,166,817	-		Ga0059261_4041	0.54	-1.8
4,166,817	-		Ga0059261_4041	0.54	-3.3
4,166,817	-		Ga0059261_4041	0.54	-1.1
4,166,817	-		Ga0059261_4041	0.54	-0.9
4,167,032	+		Ga0059261_4041	0.66	-3.9
4,167,032	+		Ga0059261_4041	0.66	-3.9
4,167,032	+		Ga0059261_4041	0.66	-2.6
4,167,032	+		Ga0059261_4041	0.66	-1.6
4,167,033	-		Ga0059261_4041	0.66	-1.9
4,167,033	-		Ga0059261_4041	0.66	-1.9
4,167,051	+		Ga0059261_4041	0.67	-1.6
4,167,173	+		Ga0059261_4041	0.73	-2.5
4,167,174	-		Ga0059261_4041	0.73	-3.3
4,167,336	+		Ga0059261_4041	0.81	-2.2
4,167,336	+		Ga0059261_4041	0.81	-2.5
4,167,336	+		Ga0059261_4041	0.81	-2.1
4,167,336	+		Ga0059261_4041	0.81	-4.0
4,167,336	+		Ga0059261_4041	0.81	-2.5
4,167,337	-		Ga0059261_4041	0.81	-3.5
4,167,337	-		Ga0059261_4041	0.81	-3.9
4,167,337	-		Ga0059261_4041	0.81	-1.8
4,167,339	-		Ga0059261_4041	0.81	-0.6
4,167,339	-				-1.1
4,167,339	-		Ga0059261_4041	0.81	-3.3
4,167,339	-		Ga0059261_4041	0.81	-3.0
4,167,339	-				-0.3
4,167,551	+				-2.4
4,167,552	-				-2.9
4,167,552	-				-3.5
4,167,644	+				+0.7
4,167,645	-				-1.4
4,167,684	-				-0.6
4,167,828	+				-1.1
4,167,844	-				-1.8
4,167,904	+				-3.8
4,167,904	+				-0.6
4,167,904	+				-1.1
4,167,905	-				-0.6
4,167,905	-				-3.5
4,167,905	-				-3.0
4,167,905	-				-2.0
4,167,975	+		Ga0059261_4042	0.17	-2.4
4,168,101	+		Ga0059261_4042	0.31	-1.0
4,168,135	+		Ga0059261_4042	0.35	-2.7
4,168,135	+		Ga0059261_4042	0.35	-2.0
4,168,136	-		Ga0059261_4042	0.35	-4.3
4,168,136	-		Ga0059261_4042	0.35	-2.4
4,168,136	-		Ga0059261_4042	0.35	-2.3
4,168,136	-		Ga0059261_4042	0.35	-3.2
4,168,137	+		Ga0059261_4042	0.35	-2.2
4,168,137	+		Ga0059261_4042	0.35	+0.1
4,168,137	+		Ga0059261_4042	0.35	-2.2
4,168,137	+		Ga0059261_4042	0.35	-2.3
4,168,137	+		Ga0059261_4042	0.35	-2.5
4,168,137	+		Ga0059261_4042	0.35	-2.7
4,168,138	-		Ga0059261_4042	0.35	-1.7
4,168,138	-		Ga0059261_4042	0.35	-3.3
4,168,138	-		Ga0059261_4042	0.35	-2.9
4,168,138	-		Ga0059261_4042	0.35	-2.5
4,168,138	-		Ga0059261_4042	0.35	-0.3
4,168,138	-		Ga0059261_4042	0.35	-3.0
4,168,138	-		Ga0059261_4042	0.35	-1.9
4,168,215	+		Ga0059261_4042	0.44	-3.5
4,168,215	+		Ga0059261_4042	0.44	-4.4
4,168,215	+		Ga0059261_4042	0.44	-3.7
4,168,215	+		Ga0059261_4042	0.44	-3.1
4,168,215	+		Ga0059261_4042	0.44	-2.6
4,168,350	+		Ga0059261_4042	0.59	-2.2
4,168,350	+		Ga0059261_4042	0.59	-0.9
4,168,350	+				-0.3
4,168,350	+		Ga0059261_4042	0.59	-1.5
4,168,350	+		Ga0059261_4042	0.59	-2.3
4,168,350	+		Ga0059261_4042	0.59	-0.9
4,168,350	+		Ga0059261_4042	0.59	-3.3
4,168,350	+		Ga0059261_4042	0.59	-2.8
4,168,350	+		Ga0059261_4042	0.59	-4.8
4,168,350	+		Ga0059261_4042	0.59	-2.0
4,168,350	+		Ga0059261_4042	0.59	-2.6
4,168,350	+				-1.1
4,168,351	-				-0.6
4,168,351	-		Ga0059261_4042	0.59	-3.1
4,168,351	-		Ga0059261_4042	0.59	-2.9
4,168,351	-		Ga0059261_4042	0.59	-3.3
4,168,351	-		Ga0059261_4042	0.59	+0.1
4,168,351	-		Ga0059261_4042	0.59	-2.1
4,168,351	-		Ga0059261_4042	0.59	-2.4
4,168,351	-		Ga0059261_4042	0.59	-2.3
4,168,396	+		Ga0059261_4042	0.64	-1.6
4,168,506	+		Ga0059261_4042	0.76	-1.8
4,168,506	+		Ga0059261_4042	0.76	-2.0
4,168,506	+				-0.3
4,168,506	+		Ga0059261_4042	0.76	-4.5
4,168,506	+				-0.6
4,168,506	+		Ga0059261_4042	0.76	-0.6
4,168,507	-		Ga0059261_4042	0.76	-1.9
4,168,507	-		Ga0059261_4042	0.76	-1.0
4,168,507	-		Ga0059261_4042	0.76	-2.6
4,168,507	-		Ga0059261_4042	0.76	-3.9
4,168,507	-		Ga0059261_4042	0.76	-4.7
4,168,507	-		Ga0059261_4042	0.76	-2.6
4,168,507	-		Ga0059261_4042	0.76	-2.4
4,168,532	-		Ga0059261_4042	0.79	-2.9
4,168,532	-		Ga0059261_4042	0.79	-3.5
4,168,569	+		Ga0059261_4042	0.83	-1.9
4,168,569	+		Ga0059261_4042	0.83	-2.2
4,168,570	-		Ga0059261_4042	0.84	-2.8
4,168,623	+		Ga0059261_4042	0.89	-2.5
4,168,669	+				-1.8
4,168,670	-				-3.7
4,168,688	+				-1.4