Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3790 and Ga0059261_3791 are separated by 97 nucleotides Ga0059261_3791 and Ga0059261_3792 overlap by 4 nucleotides Ga0059261_3792 and Ga0059261_3793 are separated by 108 nucleotides
Ga0059261_3790: Ga0059261_3790 - Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component, at 3,891,677 to 3,893,143
_3790
Ga0059261_3791: Ga0059261_3791 - hypothetical protein, at 3,893,241 to 3,893,564
_3791
Ga0059261_3792: Ga0059261_3792 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 3,893,561 to 3,894,349
_3792
Ga0059261_3793: Ga0059261_3793 - Acyl-CoA dehydrogenases, at 3,894,458 to 3,895,603
_3793
Position (kb)
3893
3894
3895 Strain fitness (log2 ratio)
-2
-1
0
1 at 3893.322 kb on + strand, within Ga0059261_3791 at 3893.322 kb on + strand, within Ga0059261_3791 at 3893.322 kb on + strand, within Ga0059261_3791 at 3893.323 kb on - strand, within Ga0059261_3791 at 3893.323 kb on - strand, within Ga0059261_3791 at 3893.323 kb on - strand, within Ga0059261_3791 at 3893.323 kb on - strand, within Ga0059261_3791 at 3893.397 kb on + strand, within Ga0059261_3791 at 3893.397 kb on + strand, within Ga0059261_3791 at 3893.397 kb on + strand, within Ga0059261_3791 at 3893.397 kb on + strand, within Ga0059261_3791 at 3893.397 kb on + strand, within Ga0059261_3791 at 3893.397 kb on + strand, within Ga0059261_3791 at 3893.397 kb on + strand, within Ga0059261_3791 at 3893.397 kb on + strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.398 kb on - strand, within Ga0059261_3791 at 3893.410 kb on - strand, within Ga0059261_3791 at 3893.451 kb on + strand, within Ga0059261_3791 at 3893.452 kb on - strand, within Ga0059261_3791 at 3893.452 kb on - strand, within Ga0059261_3791 at 3893.454 kb on + strand, within Ga0059261_3791 at 3893.455 kb on - strand, within Ga0059261_3791 at 3893.455 kb on - strand, within Ga0059261_3791 at 3893.455 kb on - strand, within Ga0059261_3791 at 3893.455 kb on - strand, within Ga0059261_3791 at 3893.517 kb on + strand, within Ga0059261_3791 at 3893.517 kb on + strand, within Ga0059261_3791 at 3893.545 kb on + strand at 3893.562 kb on + strand at 3893.563 kb on - strand at 3893.573 kb on - strand at 3893.634 kb on + strand at 3893.634 kb on + strand at 3893.634 kb on + strand at 3893.634 kb on + strand at 3893.635 kb on - strand at 3893.635 kb on - strand at 3893.635 kb on - strand at 3893.809 kb on + strand, within Ga0059261_3792 at 3893.809 kb on + strand, within Ga0059261_3792 at 3893.838 kb on + strand, within Ga0059261_3792 at 3893.838 kb on + strand, within Ga0059261_3792 at 3893.839 kb on - strand, within Ga0059261_3792 at 3893.865 kb on + strand, within Ga0059261_3792 at 3893.865 kb on + strand, within Ga0059261_3792 at 3893.865 kb on + strand, within Ga0059261_3792 at 3893.865 kb on + strand, within Ga0059261_3792 at 3893.865 kb on + strand, within Ga0059261_3792 at 3893.865 kb on + strand at 3893.865 kb on + strand, within Ga0059261_3792 at 3893.865 kb on + strand, within Ga0059261_3792 at 3893.865 kb on + strand, within Ga0059261_3792 at 3893.866 kb on - strand, within Ga0059261_3792 at 3893.866 kb on - strand, within Ga0059261_3792 at 3893.866 kb on - strand, within Ga0059261_3792 at 3893.866 kb on - strand, within Ga0059261_3792 at 3893.866 kb on - strand, within Ga0059261_3792 at 3893.866 kb on - strand, within Ga0059261_3792 at 3893.866 kb on - strand, within Ga0059261_3792 at 3893.866 kb on - strand, within Ga0059261_3792 at 3893.869 kb on + strand, within Ga0059261_3792 at 3893.869 kb on + strand, within Ga0059261_3792 at 3893.869 kb on + strand, within Ga0059261_3792 at 3893.869 kb on + strand at 3893.870 kb on - strand, within Ga0059261_3792 at 3893.870 kb on - strand, within Ga0059261_3792 at 3893.870 kb on - strand, within Ga0059261_3792 at 3893.871 kb on + strand, within Ga0059261_3792 at 3893.871 kb on + strand, within Ga0059261_3792 at 3893.871 kb on + strand, within Ga0059261_3792 at 3893.871 kb on + strand, within Ga0059261_3792 at 3893.871 kb on + strand, within Ga0059261_3792 at 3893.871 kb on + strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3893.872 kb on - strand, within Ga0059261_3792 at 3894.232 kb on + strand, within Ga0059261_3792 at 3894.232 kb on + strand, within Ga0059261_3792 at 3894.232 kb on + strand, within Ga0059261_3792 at 3894.232 kb on + strand, within Ga0059261_3792 at 3894.232 kb on + strand, within Ga0059261_3792 at 3894.232 kb on + strand, within Ga0059261_3792 at 3894.232 kb on + strand, within Ga0059261_3792 at 3894.232 kb on + strand, within Ga0059261_3792 at 3894.233 kb on - strand, within Ga0059261_3792 at 3894.233 kb on - strand, within Ga0059261_3792 at 3894.233 kb on - strand, within Ga0059261_3792 at 3894.233 kb on - strand, within Ga0059261_3792 at 3894.233 kb on - strand, within Ga0059261_3792 at 3894.233 kb on - strand, within Ga0059261_3792 at 3894.233 kb on - strand, within Ga0059261_3792 at 3894.233 kb on - strand, within Ga0059261_3792 at 3894.234 kb on + strand, within Ga0059261_3792 at 3894.234 kb on + strand, within Ga0059261_3792 at 3894.234 kb on + strand, within Ga0059261_3792 at 3894.234 kb on + strand, within Ga0059261_3792 at 3894.234 kb on + strand, within Ga0059261_3792 at 3894.234 kb on + strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.235 kb on - strand, within Ga0059261_3792 at 3894.377 kb on + strand at 3894.377 kb on + strand at 3894.377 kb on + strand at 3894.378 kb on - strand at 3894.378 kb on - strand at 3894.459 kb on + strand at 3894.459 kb on + strand at 3894.460 kb on - strand at 3894.460 kb on - strand at 3894.522 kb on + strand at 3894.522 kb on + strand at 3894.522 kb on + strand at 3894.523 kb on - strand at 3894.523 kb on - strand at 3894.523 kb on - strand at 3894.523 kb on - strand at 3894.523 kb on - strand at 3894.549 kb on + strand at 3894.567 kb on + strand at 3894.568 kb on - strand at 3894.568 kb on - strand at 3894.577 kb on + strand, within Ga0059261_3793 at 3894.578 kb on - strand, within Ga0059261_3793 at 3894.579 kb on + strand, within Ga0059261_3793 at 3894.579 kb on + strand, within Ga0059261_3793 at 3894.579 kb on + strand, within Ga0059261_3793 at 3894.580 kb on - strand, within Ga0059261_3793 at 3894.580 kb on - strand, within Ga0059261_3793 at 3894.580 kb on - strand, within Ga0059261_3793 at 3894.816 kb on + strand, within Ga0059261_3793 at 3894.816 kb on + strand, within Ga0059261_3793 at 3894.816 kb on + strand, within Ga0059261_3793 at 3894.817 kb on - strand, within Ga0059261_3793 at 3894.817 kb on - strand, within Ga0059261_3793 at 3894.871 kb on + strand, within Ga0059261_3793 at 3894.871 kb on + strand, within Ga0059261_3793 at 3894.871 kb on + strand, within Ga0059261_3793 at 3895.049 kb on + strand, within Ga0059261_3793 at 3895.135 kb on + strand, within Ga0059261_3793 at 3895.136 kb on - strand, within Ga0059261_3793 at 3895.136 kb on - strand, within Ga0059261_3793 at 3895.164 kb on + strand, within Ga0059261_3793 at 3895.165 kb on - strand, within Ga0059261_3793 at 3895.165 kb on - strand, within Ga0059261_3793 at 3895.165 kb on - strand, within Ga0059261_3793
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 3,893,322 + Ga0059261_3791 0.25 +0.1 3,893,322 + Ga0059261_3791 0.25 -0.6 3,893,322 + Ga0059261_3791 0.25 -1.3 3,893,323 - Ga0059261_3791 0.25 +0.8 3,893,323 - Ga0059261_3791 0.25 -0.3 3,893,323 - Ga0059261_3791 0.25 +0.1 3,893,323 - Ga0059261_3791 0.25 +0.5 3,893,397 + Ga0059261_3791 0.48 -0.0 3,893,397 + Ga0059261_3791 0.48 -0.1 3,893,397 + Ga0059261_3791 0.48 -0.2 3,893,397 + Ga0059261_3791 0.48 -0.7 3,893,397 + Ga0059261_3791 0.48 +0.2 3,893,397 + Ga0059261_3791 0.48 -0.1 3,893,397 + Ga0059261_3791 0.48 -1.2 3,893,397 + Ga0059261_3791 0.48 +0.4 3,893,398 - Ga0059261_3791 0.48 +0.2 3,893,398 - Ga0059261_3791 0.48 +0.3 3,893,398 - Ga0059261_3791 0.48 -1.0 3,893,398 - Ga0059261_3791 0.48 +0.4 3,893,398 - Ga0059261_3791 0.48 -0.0 3,893,398 - Ga0059261_3791 0.48 -0.4 3,893,398 - Ga0059261_3791 0.48 -0.1 3,893,398 - Ga0059261_3791 0.48 -0.4 3,893,398 - Ga0059261_3791 0.48 +0.7 3,893,410 - Ga0059261_3791 0.52 +0.7 3,893,451 + Ga0059261_3791 0.65 +0.1 3,893,452 - Ga0059261_3791 0.65 +0.7 3,893,452 - Ga0059261_3791 0.65 -1.1 3,893,454 + Ga0059261_3791 0.66 +0.3 3,893,455 - Ga0059261_3791 0.66 -0.3 3,893,455 - Ga0059261_3791 0.66 -1.2 3,893,455 - Ga0059261_3791 0.66 -0.6 3,893,455 - Ga0059261_3791 0.66 -0.3 3,893,517 + Ga0059261_3791 0.85 +0.2 3,893,517 + Ga0059261_3791 0.85 -0.6 3,893,545 + +0.3 3,893,562 + +0.4 3,893,563 - +1.5 3,893,573 - -0.1 3,893,634 + -0.6 3,893,634 + +1.4 3,893,634 + -0.5 3,893,634 + +0.1 3,893,635 - -2.5 3,893,635 - +0.2 3,893,635 - -0.1 3,893,809 + Ga0059261_3792 0.31 -0.4 3,893,809 + Ga0059261_3792 0.31 -0.1 3,893,838 + Ga0059261_3792 0.35 -0.6 3,893,838 + Ga0059261_3792 0.35 -0.9 3,893,839 - Ga0059261_3792 0.35 -1.1 3,893,865 + Ga0059261_3792 0.39 +0.1 3,893,865 + Ga0059261_3792 0.39 -0.1 3,893,865 + Ga0059261_3792 0.39 -0.4 3,893,865 + Ga0059261_3792 0.39 -0.7 3,893,865 + Ga0059261_3792 0.39 +0.3 3,893,865 + +0.9 3,893,865 + Ga0059261_3792 0.39 +0.7 3,893,865 + Ga0059261_3792 0.39 +0.7 3,893,865 + Ga0059261_3792 0.39 -0.0 3,893,866 - Ga0059261_3792 0.39 -0.6 3,893,866 - Ga0059261_3792 0.39 -0.4 3,893,866 - Ga0059261_3792 0.39 -1.0 3,893,866 - Ga0059261_3792 0.39 -0.4 3,893,866 - Ga0059261_3792 0.39 +0.6 3,893,866 - Ga0059261_3792 0.39 +0.3 3,893,866 - Ga0059261_3792 0.39 +0.3 3,893,866 - Ga0059261_3792 0.39 -2.0 3,893,869 + Ga0059261_3792 0.39 +0.6 3,893,869 + Ga0059261_3792 0.39 +0.8 3,893,869 + Ga0059261_3792 0.39 -0.2 3,893,869 + +0.7 3,893,870 - Ga0059261_3792 0.39 -0.1 3,893,870 - Ga0059261_3792 0.39 +1.4 3,893,870 - Ga0059261_3792 0.39 -0.2 3,893,871 + Ga0059261_3792 0.39 +0.9 3,893,871 + Ga0059261_3792 0.39 -0.7 3,893,871 + Ga0059261_3792 0.39 +0.3 3,893,871 + Ga0059261_3792 0.39 +0.7 3,893,871 + Ga0059261_3792 0.39 +0.1 3,893,871 + Ga0059261_3792 0.39 -0.2 3,893,872 - Ga0059261_3792 0.39 +1.3 3,893,872 - Ga0059261_3792 0.39 -0.2 3,893,872 - Ga0059261_3792 0.39 +0.4 3,893,872 - Ga0059261_3792 0.39 +0.8 3,893,872 - Ga0059261_3792 0.39 +0.6 3,893,872 - Ga0059261_3792 0.39 -0.1 3,893,872 - Ga0059261_3792 0.39 -0.6 3,893,872 - Ga0059261_3792 0.39 +0.4 3,893,872 - Ga0059261_3792 0.39 -0.8 3,894,232 + Ga0059261_3792 0.85 +1.1 3,894,232 + Ga0059261_3792 0.85 +0.2 3,894,232 + Ga0059261_3792 0.85 +1.3 3,894,232 + Ga0059261_3792 0.85 +0.2 3,894,232 + Ga0059261_3792 0.85 -0.1 3,894,232 + Ga0059261_3792 0.85 -0.5 3,894,232 + Ga0059261_3792 0.85 +0.1 3,894,232 + Ga0059261_3792 0.85 -1.1 3,894,233 - Ga0059261_3792 0.85 +1.0 3,894,233 - Ga0059261_3792 0.85 +0.1 3,894,233 - Ga0059261_3792 0.85 -1.0 3,894,233 - Ga0059261_3792 0.85 +0.7 3,894,233 - Ga0059261_3792 0.85 -0.2 3,894,233 - Ga0059261_3792 0.85 +1.7 3,894,233 - Ga0059261_3792 0.85 -0.4 3,894,233 - Ga0059261_3792 0.85 +0.4 3,894,234 + Ga0059261_3792 0.85 +0.6 3,894,234 + Ga0059261_3792 0.85 -0.1 3,894,234 + Ga0059261_3792 0.85 -0.8 3,894,234 + Ga0059261_3792 0.85 -0.5 3,894,234 + Ga0059261_3792 0.85 +0.7 3,894,234 + Ga0059261_3792 0.85 -1.2 3,894,235 - Ga0059261_3792 0.85 -2.0 3,894,235 - Ga0059261_3792 0.85 -0.5 3,894,235 - Ga0059261_3792 0.85 -0.1 3,894,235 - Ga0059261_3792 0.85 -0.2 3,894,235 - Ga0059261_3792 0.85 -1.5 3,894,235 - Ga0059261_3792 0.85 +0.4 3,894,235 - Ga0059261_3792 0.85 +0.1 3,894,235 - Ga0059261_3792 0.85 +0.1 3,894,235 - Ga0059261_3792 0.85 +0.9 3,894,235 - Ga0059261_3792 0.85 -0.5 3,894,235 - Ga0059261_3792 0.85 +0.2 3,894,235 - Ga0059261_3792 0.85 +0.8 3,894,377 + -0.2 3,894,377 + -0.1 3,894,377 + -0.7 3,894,378 - -0.2 3,894,378 - +0.5 3,894,459 + -0.2 3,894,459 + -0.3 3,894,460 - +0.1 3,894,460 - -0.5 3,894,522 + +0.2 3,894,522 + -0.3 3,894,522 + +0.4 3,894,523 - +0.5 3,894,523 - +0.4 3,894,523 - +0.0 3,894,523 - -0.5 3,894,523 - -0.6 3,894,549 + +0.6 3,894,567 + -0.4 3,894,568 - +0.3 3,894,568 - +0.1 3,894,577 + Ga0059261_3793 0.10 -0.2 3,894,578 - Ga0059261_3793 0.10 +1.1 3,894,579 + Ga0059261_3793 0.11 +0.1 3,894,579 + Ga0059261_3793 0.11 -0.7 3,894,579 + Ga0059261_3793 0.11 -1.2 3,894,580 - Ga0059261_3793 0.11 -0.2 3,894,580 - Ga0059261_3793 0.11 -0.2 3,894,580 - Ga0059261_3793 0.11 +0.8 3,894,816 + Ga0059261_3793 0.31 +1.4 3,894,816 + Ga0059261_3793 0.31 +0.3 3,894,816 + Ga0059261_3793 0.31 -0.3 3,894,817 - Ga0059261_3793 0.31 -0.2 3,894,817 - Ga0059261_3793 0.31 +0.0 3,894,871 + Ga0059261_3793 0.36 +1.0 3,894,871 + Ga0059261_3793 0.36 -0.7 3,894,871 + Ga0059261_3793 0.36 +0.3 3,895,049 + Ga0059261_3793 0.52 +0.1 3,895,135 + Ga0059261_3793 0.59 -0.0 3,895,136 - Ga0059261_3793 0.59 -0.2 3,895,136 - Ga0059261_3793 0.59 +0.9 3,895,164 + Ga0059261_3793 0.62 -0.0 3,895,165 - Ga0059261_3793 0.62 -1.9 3,895,165 - Ga0059261_3793 0.62 +0.6 3,895,165 - Ga0059261_3793 0.62 +0.7
Or see this region's nucleotide sequence