Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3277

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,409,072	+		Ga0059261_3276	0.53	-1.9
3,409,072	+		Ga0059261_3276	0.53	+0.2
3,409,073	-		Ga0059261_3276	0.53	+0.2
3,409,073	-		Ga0059261_3276	0.53	-1.0
3,409,378	+		Ga0059261_3276	0.70	+0.4
3,409,378	+		Ga0059261_3276	0.70	-1.1
3,409,379	-		Ga0059261_3276	0.70	-0.8
3,409,411	+		Ga0059261_3276	0.72	+0.4
3,409,411	+		Ga0059261_3276	0.72	-2.1
3,409,412	-		Ga0059261_3276	0.72	-0.5
3,409,412	-		Ga0059261_3276	0.72	+0.2
3,409,627	+		Ga0059261_3276	0.84	+0.3
3,409,627	+		Ga0059261_3276	0.84	-1.2
3,409,628	-		Ga0059261_3276	0.84	-1.7
3,409,628	-		Ga0059261_3276	0.84	-1.4
3,409,628	-		Ga0059261_3276	0.84	-0.0
3,409,628	-		Ga0059261_3276	0.84	-0.3
3,409,847	+				-0.2
3,409,848	-				-0.8
3,409,921	+				-1.2
3,409,922	-				+0.5
3,409,971	+				+1.3
3,409,971	+				+0.1
3,409,972	-				+0.5
3,410,005	+				+1.2
3,410,006	-				-0.6
3,410,007	+				+1.1
3,410,008	-				-1.0
3,410,008	-				-0.6
3,410,069	+				-1.4
3,410,069	+				-0.6
3,410,069	+				-0.8
3,410,069	+				+0.3
3,410,069	+				-1.7
3,410,069	+				-0.3
3,410,069	+				+0.2
3,410,069	+				-0.4
3,410,070	-				-0.2
3,410,070	-				-0.7
3,410,070	-				-0.1
3,410,070	-				-0.6
3,410,070	-				-0.8
3,410,070	-				-0.6
3,410,070	-				-0.2
3,410,070	-				-0.7
3,410,070	-				-2.1
3,410,078	+				-0.1
3,410,079	-				-0.1
3,410,079	-				-2.2
3,410,079	-				+0.5
3,410,079	-				-1.4
3,410,079	-				-0.8
3,410,168	+				+0.1
3,410,169	-				-0.6
3,410,169	-				-0.2
3,410,453	+		Ga0059261_3277	0.32	-1.1
3,410,454	-		Ga0059261_3277	0.32	+0.8
3,410,454	-		Ga0059261_3277	0.32	+0.9
3,410,519	+		Ga0059261_3277	0.37	-0.9
3,410,519	+		Ga0059261_3277	0.37	-0.4
3,410,519	+		Ga0059261_3277	0.37	-0.3
3,410,519	+		Ga0059261_3277	0.37	-0.1
3,410,519	+				+1.8
3,410,519	+		Ga0059261_3277	0.37	-0.6
3,410,519	+		Ga0059261_3277	0.37	-0.7
3,410,520	-		Ga0059261_3277	0.37	-0.8
3,410,528	+		Ga0059261_3277	0.38	-1.6
3,410,528	+		Ga0059261_3277	0.38	+0.1
3,410,529	-		Ga0059261_3277	0.38	-1.1
3,410,529	-		Ga0059261_3277	0.38	-0.3
3,410,529	-		Ga0059261_3277	0.38	-1.0
3,410,615	+		Ga0059261_3277	0.45	-2.0
3,410,616	-		Ga0059261_3277	0.45	-1.7
3,410,616	-		Ga0059261_3277	0.45	-1.5
3,410,616	-		Ga0059261_3277	0.45	-2.2
3,410,616	-		Ga0059261_3277	0.45	-1.2
3,410,789	+		Ga0059261_3277	0.59	-1.6
3,410,789	+		Ga0059261_3277	0.59	-0.8
3,410,789	+		Ga0059261_3277	0.59	-0.4
3,410,789	+		Ga0059261_3277	0.59	-1.1
3,410,790	-		Ga0059261_3277	0.59	-1.3
3,410,813	+		Ga0059261_3277	0.61	-1.0
3,410,813	+		Ga0059261_3277	0.61	-1.1
3,410,942	+		Ga0059261_3277	0.71	-0.9
3,410,942	+		Ga0059261_3277	0.71	-2.0
3,410,942	+		Ga0059261_3277	0.71	-0.7
3,410,943	-		Ga0059261_3277	0.71	-0.9
3,410,943	-		Ga0059261_3277	0.71	-0.8
3,410,984	+		Ga0059261_3277	0.75	-1.2
3,410,985	-		Ga0059261_3277	0.75	-1.0
3,411,070	+		Ga0059261_3277	0.82	-1.2
3,411,070	+		Ga0059261_3277	0.82	-0.4
3,411,071	-		Ga0059261_3277	0.82	-1.4
3,411,118	+		Ga0059261_3277	0.86	-0.4
3,411,118	+		Ga0059261_3277	0.86	-0.3
3,411,118	+		Ga0059261_3277	0.86	-1.0
3,411,119	-		Ga0059261_3277	0.86	-0.1
3,411,119	-		Ga0059261_3277	0.86	-0.7
3,411,119	-		Ga0059261_3277	0.86	-0.1
3,411,119	-		Ga0059261_3277	0.86	-0.7
3,411,119	-		Ga0059261_3277	0.86	+1.3
3,411,188	+				-0.4
3,411,188	+				-0.1
3,411,188	+				-0.4
3,411,188	+				-1.2
3,411,188	+				-0.3
3,411,188	+				-0.7
3,411,189	-				-3.0
3,411,189	-				-0.6
3,411,189	-				+0.2
3,411,215	+				-0.9
3,411,216	-				-0.2
3,411,486	+		Ga0059261_3278	0.45	-1.0
3,411,486	+		Ga0059261_3278	0.45	-0.4
3,411,486	+		Ga0059261_3278	0.45	+0.2
3,411,486	+		Ga0059261_3278	0.45	-0.2
3,411,486	+		Ga0059261_3278	0.45	+0.6
3,411,486	+		Ga0059261_3278	0.45	-0.0
3,411,487	-		Ga0059261_3278	0.45	+0.4
3,411,487	-		Ga0059261_3278	0.45	-0.3
3,411,487	-		Ga0059261_3278	0.45	+0.0
3,411,487	-		Ga0059261_3278	0.45	+0.3
3,411,487	-		Ga0059261_3278	0.45	-0.0
3,411,487	-		Ga0059261_3278	0.45	+0.6
3,411,497	+		Ga0059261_3278	0.48	-0.0
3,411,498	-		Ga0059261_3278	0.48	-0.9
3,411,498	-		Ga0059261_3278	0.48	+0.2
3,411,516	+		Ga0059261_3278	0.52	-0.1
3,411,516	+		Ga0059261_3278	0.52	+1.5
3,411,517	-		Ga0059261_3278	0.52	+0.8
3,411,517	-		Ga0059261_3278	0.52	-1.9
3,411,540	+		Ga0059261_3278	0.58	-0.7
3,411,540	+		Ga0059261_3278	0.58	-0.6
3,411,540	+		Ga0059261_3278	0.58	+0.8
3,411,540	+		Ga0059261_3278	0.58	+0.4
3,411,540	+		Ga0059261_3278	0.58	+0.9
3,411,540	+		Ga0059261_3278	0.58	-0.1
3,411,540	+		Ga0059261_3278	0.58	-0.7
3,411,540	+		Ga0059261_3278	0.58	+0.0
3,411,540	+		Ga0059261_3278	0.58	-0.4
3,411,540	+		Ga0059261_3278	0.58	+0.5
3,411,541	-		Ga0059261_3278	0.58	-1.3
3,411,541	-		Ga0059261_3278	0.58	-0.6
3,411,541	-		Ga0059261_3278	0.58	+0.2
3,411,541	-		Ga0059261_3278	0.58	-0.7
3,411,541	-		Ga0059261_3278	0.58	+0.0
3,411,541	-		Ga0059261_3278	0.58	-0.4
3,411,541	-		Ga0059261_3278	0.58	-0.8
3,411,541	-		Ga0059261_3278	0.58	+0.2
3,411,541	-		Ga0059261_3278	0.58	+0.4
3,411,541	-		Ga0059261_3278	0.58	+0.6
3,411,541	-				+2.3
3,411,541	-		Ga0059261_3278	0.58	+0.5
3,411,541	-		Ga0059261_3278	0.58	+0.2
3,411,541	-		Ga0059261_3278	0.58	-0.3
3,411,541	-		Ga0059261_3278	0.58	+0.9
3,411,541	-		Ga0059261_3278	0.58	-0.2
3,411,541	-		Ga0059261_3278	0.58	+0.3
3,411,541	-		Ga0059261_3278	0.58	-0.3
3,411,541	-		Ga0059261_3278	0.58	-0.2
3,411,541	-		Ga0059261_3278	0.58	-0.8
3,411,541	-		Ga0059261_3278	0.58	+0.1
3,411,541	-		Ga0059261_3278	0.58	+0.1
3,411,541	-		Ga0059261_3278	0.58	+0.2
3,411,650	+		Ga0059261_3278	0.86	-0.1
3,411,650	+		Ga0059261_3278	0.86	-0.5
3,411,651	-		Ga0059261_3278	0.86	-0.5
3,411,651	-		Ga0059261_3278	0.86	+1.5
3,411,651	-		Ga0059261_3278	0.86	+0.3
3,411,651	-		Ga0059261_3278	0.86	+0.1
3,411,651	-		Ga0059261_3278	0.86	-0.0
3,411,705	+				+0.8
3,411,705	+				-0.6
3,411,705	+				-0.2
3,411,706	-				+0.4
3,411,706	-				+0.3
3,411,706	-				-0.7
3,412,152	+		Ga0059261_3279	0.80	+0.1
3,412,152	+		Ga0059261_3279	0.80	-0.7
3,412,152	+		Ga0059261_3279	0.80	-0.0
3,412,153	-		Ga0059261_3279	0.80	-0.4
3,412,153	-		Ga0059261_3279	0.80	-0.2
3,412,153	-		Ga0059261_3279	0.80	-0.1
3,412,153	-		Ga0059261_3279	0.80	+0.0
3,412,153	-		Ga0059261_3279	0.80	-0.8
3,412,153	-		Ga0059261_3279	0.80	-0.2
3,412,153	-		Ga0059261_3279	0.80	-0.8
3,412,196	+		Ga0059261_3279	0.88	-0.2
3,412,196	+		Ga0059261_3279	0.88	-0.2
3,412,196	+		Ga0059261_3279	0.88	+0.4
3,412,197	-		Ga0059261_3279	0.88	-0.6
3,412,197	-		Ga0059261_3279	0.88	-0.8
3,412,197	-		Ga0059261_3279	0.88	-0.4
3,412,261	+				-0.2
3,412,282	+				-0.7
3,412,282	+				+0.0
3,412,282	+				+0.8
3,412,283	-				+0.1
3,412,283	-				-0.6
3,412,283	-				-0.4