Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3157

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,295,289	-		Ga0059261_3155	0.78	+0.1
3,295,289	-		Ga0059261_3155	0.78	+0.0
3,295,294	+		Ga0059261_3155	0.78	-0.1
3,295,294	+		Ga0059261_3155	0.78	-0.2
3,295,294	+		Ga0059261_3155	0.78	+0.8
3,295,294	+		Ga0059261_3155	0.78	-0.2
3,295,294	+		Ga0059261_3155	0.78	-0.2
3,295,294	+		Ga0059261_3155	0.78	+0.2
3,295,294	+		Ga0059261_3155	0.78	+0.4
3,295,294	+		Ga0059261_3155	0.78	+0.1
3,295,294	+		Ga0059261_3155	0.78	-0.4
3,295,295	-		Ga0059261_3155	0.79	+0.4
3,295,295	-		Ga0059261_3155	0.79	+0.6
3,295,295	-		Ga0059261_3155	0.79	-1.3
3,295,295	-		Ga0059261_3155	0.79	+0.3
3,295,295	-		Ga0059261_3155	0.79	+0.4
3,295,295	-		Ga0059261_3155	0.79	-0.4
3,295,295	-				+0.2
3,295,351	+		Ga0059261_3155	0.84	-0.5
3,295,351	+		Ga0059261_3155	0.84	-0.4
3,295,351	+		Ga0059261_3155	0.84	-0.7
3,295,352	-		Ga0059261_3155	0.84	-0.1
3,295,352	-		Ga0059261_3155	0.84	-0.6
3,295,353	+		Ga0059261_3155	0.84	+0.2
3,295,353	+		Ga0059261_3155	0.84	-0.9
3,295,369	+		Ga0059261_3155	0.86	-0.1
3,295,369	+		Ga0059261_3155	0.86	-1.0
3,295,369	+		Ga0059261_3155	0.86	+0.4
3,295,370	-		Ga0059261_3155	0.86	-0.6
3,295,370	-		Ga0059261_3155	0.86	-0.3
3,295,370	-		Ga0059261_3155	0.86	+0.2
3,295,370	-		Ga0059261_3155	0.86	+0.3
3,295,462	+				+0.7
3,295,462	+				-0.5
3,295,462	+				+0.2
3,295,462	+				+0.8
3,295,462	+				+1.1
3,295,462	+				-0.1
3,295,462	+				+0.1
3,295,462	+				-0.3
3,295,463	-				+0.1
3,295,463	-				+0.4
3,295,463	-				+0.9
3,295,463	-				+0.1
3,295,463	-				+0.1
3,295,463	-				-0.6
3,295,463	-				+0.1
3,295,463	-				+0.2
3,295,463	-				+0.7
3,295,463	-				-0.2
3,295,467	+				-1.0
3,295,468	-				+0.2
3,295,468	-				-0.6
3,295,472	-				+0.2
3,295,649	+		Ga0059261_3156	0.16	-2.1
3,295,649	+		Ga0059261_3156	0.16	-2.4
3,295,649	+		Ga0059261_3156	0.16	-0.5
3,295,650	-		Ga0059261_3156	0.17	-2.4
3,295,650	-		Ga0059261_3156	0.17	-0.7
3,295,650	-		Ga0059261_3156	0.17	-1.0
3,295,650	-		Ga0059261_3156	0.17	-1.8
3,295,697	+		Ga0059261_3156	0.26	-0.6
3,295,698	-		Ga0059261_3156	0.26	-0.8
3,295,698	-				-0.2
3,295,743	-		Ga0059261_3156	0.35	-0.3
3,295,743	-		Ga0059261_3156	0.35	+0.8
3,295,859	+		Ga0059261_3156	0.57	-2.2
3,295,859	+		Ga0059261_3156	0.57	-1.7
3,295,859	+		Ga0059261_3156	0.57	-2.0
3,295,859	+				-1.1
3,295,859	+		Ga0059261_3156	0.57	-2.7
3,295,859	+		Ga0059261_3156	0.57	-0.8
3,295,860	-		Ga0059261_3156	0.57	-0.2
3,295,860	-		Ga0059261_3156	0.57	-1.1
3,296,067	+				-2.0
3,296,067	+				-0.7
3,296,067	+				-1.1
3,296,068	-				-1.2
3,296,068	-				-0.9
3,296,068	-				+0.0
3,296,086	+				-1.9
3,296,086	+				-1.9
3,296,086	+				-0.4
3,296,087	-				+0.6
3,296,087	-				+0.6
3,296,087	-				+0.3
3,296,103	-				-0.2
3,296,154	+				+0.1
3,296,155	-				+0.7
3,296,237	+				-2.6
3,296,237	+				+0.2
3,296,238	-				-2.8
3,296,273	-				-1.9
3,296,273	-				-0.7
3,296,444	-		Ga0059261_3157	0.22	-1.5
3,296,500	+		Ga0059261_3157	0.26	-1.4
3,296,500	+		Ga0059261_3157	0.26	-1.6
3,296,500	+		Ga0059261_3157	0.26	+0.2
3,296,500	+		Ga0059261_3157	0.26	-0.9
3,296,500	+		Ga0059261_3157	0.26	-1.7
3,296,500	+		Ga0059261_3157	0.26	-2.2
3,296,500	+		Ga0059261_3157	0.26	-3.3
3,296,500	+		Ga0059261_3157	0.26	-1.4
3,296,500	+		Ga0059261_3157	0.26	-2.6
3,296,500	+		Ga0059261_3157	0.26	-1.7
3,296,501	-		Ga0059261_3157	0.26	-1.6
3,296,501	-		Ga0059261_3157	0.26	-1.9
3,296,501	-		Ga0059261_3157	0.26	-1.1
3,296,501	-		Ga0059261_3157	0.26	+0.2
3,296,501	-		Ga0059261_3157	0.26	-2.5
3,296,501	-		Ga0059261_3157	0.26	-1.0
3,296,501	-		Ga0059261_3157	0.26	-0.6
3,296,501	-				+0.8
3,296,501	-		Ga0059261_3157	0.26	-2.1
3,296,501	-		Ga0059261_3157	0.26	-1.1
3,296,501	-		Ga0059261_3157	0.26	-1.1
3,296,560	+		Ga0059261_3157	0.30	-1.2
3,296,561	-		Ga0059261_3157	0.31	-0.1
3,296,561	-		Ga0059261_3157	0.31	-1.6
3,296,561	-		Ga0059261_3157	0.31	-1.9
3,296,632	+		Ga0059261_3157	0.36	-1.0
3,296,632	+		Ga0059261_3157	0.36	-1.4
3,296,632	+		Ga0059261_3157	0.36	-1.4
3,296,632	+		Ga0059261_3157	0.36	-0.8
3,296,633	-		Ga0059261_3157	0.36	-0.1
3,296,633	-		Ga0059261_3157	0.36	-0.9
3,296,636	+		Ga0059261_3157	0.36	+0.0
3,296,636	+		Ga0059261_3157	0.36	-1.0
3,296,636	+		Ga0059261_3157	0.36	+0.0
3,296,637	-		Ga0059261_3157	0.36	-0.0
3,296,637	-		Ga0059261_3157	0.36	-1.9
3,296,637	-		Ga0059261_3157	0.36	-0.9
3,296,758	+		Ga0059261_3157	0.45	-1.2
3,296,758	+				+1.3
3,296,758	+		Ga0059261_3157	0.45	+0.8
3,296,759	-		Ga0059261_3157	0.45	-1.6
3,296,759	-		Ga0059261_3157	0.45	+0.2
3,296,759	-				-1.4
3,296,759	-		Ga0059261_3157	0.45	-1.1
3,296,764	+		Ga0059261_3157	0.45	-0.6
3,296,764	+		Ga0059261_3157	0.45	-2.6
3,296,764	+		Ga0059261_3157	0.45	-2.6
3,296,765	-		Ga0059261_3157	0.46	-1.4
3,296,765	-		Ga0059261_3157	0.46	-2.6
3,296,765	-		Ga0059261_3157	0.46	-0.2
3,296,765	-		Ga0059261_3157	0.46	+0.3
3,296,765	-		Ga0059261_3157	0.46	-2.8
3,296,765	-		Ga0059261_3157	0.46	-0.7
3,296,765	-		Ga0059261_3157	0.46	-1.2
3,296,765	-		Ga0059261_3157	0.46	-0.9
3,296,777	+		Ga0059261_3157	0.46	+1.3
3,296,788	+		Ga0059261_3157	0.47	-1.1
3,296,789	-		Ga0059261_3157	0.47	-0.6
3,296,795	+		Ga0059261_3157	0.48	-0.1
3,296,795	+		Ga0059261_3157	0.48	-1.0
3,296,795	+		Ga0059261_3157	0.48	-1.1
3,296,796	-		Ga0059261_3157	0.48	-2.2
3,296,796	-		Ga0059261_3157	0.48	+1.2
3,296,796	-				-0.6
3,296,796	-		Ga0059261_3157	0.48	-0.6
3,296,796	-		Ga0059261_3157	0.48	-3.8
3,296,796	-		Ga0059261_3157	0.48	-0.8
3,296,797	+		Ga0059261_3157	0.48	-0.9
3,296,797	+		Ga0059261_3157	0.48	-2.5
3,296,798	-		Ga0059261_3157	0.48	-1.1
3,296,798	-		Ga0059261_3157	0.48	-1.9
3,296,798	-		Ga0059261_3157	0.48	-0.6
3,296,941	+		Ga0059261_3157	0.58	-2.5
3,296,941	+		Ga0059261_3157	0.58	-1.7
3,296,942	-		Ga0059261_3157	0.59	-1.0
3,296,942	-		Ga0059261_3157	0.59	-2.5
3,296,942	-		Ga0059261_3157	0.59	-3.3
3,296,942	-		Ga0059261_3157	0.59	+0.2
3,296,942	-		Ga0059261_3157	0.59	-1.3
3,296,942	-		Ga0059261_3157	0.59	-0.8
3,296,942	-		Ga0059261_3157	0.59	-0.8
3,296,942	-		Ga0059261_3157	0.59	+0.4
3,296,942	-		Ga0059261_3157	0.59	-1.7
3,296,942	-		Ga0059261_3157	0.59	-1.8
3,296,962	+		Ga0059261_3157	0.60	-0.1
3,296,962	+		Ga0059261_3157	0.60	-2.3
3,296,962	+		Ga0059261_3157	0.60	-0.9
3,296,963	-		Ga0059261_3157	0.60	-1.8
3,296,963	-		Ga0059261_3157	0.60	-1.7
3,297,085	+		Ga0059261_3157	0.69	-0.8
3,297,085	+		Ga0059261_3157	0.69	-3.3
3,297,085	+		Ga0059261_3157	0.69	-1.6
3,297,085	+		Ga0059261_3157	0.69	+2.2
3,297,085	+		Ga0059261_3157	0.69	-0.1
3,297,086	-		Ga0059261_3157	0.69	-2.7
3,297,086	-		Ga0059261_3157	0.69	-0.6
3,297,086	-		Ga0059261_3157	0.69	-2.7
3,297,087	-				-0.2
3,297,091	+		Ga0059261_3157	0.69	-1.5
3,297,091	+		Ga0059261_3157	0.69	+0.9
3,297,091	+		Ga0059261_3157	0.69	-2.8
3,297,092	-		Ga0059261_3157	0.70	+0.4
3,297,133	+		Ga0059261_3157	0.73	-0.4
3,297,133	+		Ga0059261_3157	0.73	-0.3
3,297,133	+		Ga0059261_3157	0.73	-1.4
3,297,133	+		Ga0059261_3157	0.73	-0.4
3,297,133	+		Ga0059261_3157	0.73	-0.2
3,297,133	+		Ga0059261_3157	0.73	-0.8
3,297,133	+		Ga0059261_3157	0.73	-0.6
3,297,134	-		Ga0059261_3157	0.73	-1.1
3,297,134	-		Ga0059261_3157	0.73	-1.2
3,297,134	-		Ga0059261_3157	0.73	-3.2
3,297,134	-				+0.4
3,297,134	-		Ga0059261_3157	0.73	-1.8
3,297,134	-		Ga0059261_3157	0.73	-2.4
3,297,141	+		Ga0059261_3157	0.73	-2.6
3,297,141	+		Ga0059261_3157	0.73	-2.3
3,297,172	+		Ga0059261_3157	0.75	-2.4
3,297,172	+		Ga0059261_3157	0.75	+0.4
3,297,173	-		Ga0059261_3157	0.75	-1.1
3,297,173	-		Ga0059261_3157	0.75	-1.6
3,297,173	-		Ga0059261_3157	0.75	-2.2
3,297,173	-		Ga0059261_3157	0.75	-2.5
3,297,173	-		Ga0059261_3157	0.75	-0.9
3,297,173	-		Ga0059261_3157	0.75	-2.7
3,297,173	-		Ga0059261_3157	0.75	-0.9
3,297,430	-				-2.2
3,297,496	-				-1.6
3,297,555	+				+0.4
3,297,555	+				-1.2
3,297,851	-		Ga0059261_3158	0.42	-0.8
3,297,851	-		Ga0059261_3158	0.42	-1.4
3,298,268	+				-0.6
3,298,268	+				-0.1
3,298,268	+				-2.2
3,298,418	+		Ga0059261_3159	0.20	-0.8
3,298,418	+		Ga0059261_3159	0.20	-1.6
3,298,418	+		Ga0059261_3159	0.20	-1.7
3,298,418	+		Ga0059261_3159	0.20	-0.6
3,298,419	-		Ga0059261_3159	0.20	-1.6
3,298,419	-		Ga0059261_3159	0.20	-1.2
3,298,445	+		Ga0059261_3159	0.26	-1.1
3,298,445	+		Ga0059261_3159	0.26	-1.4
3,298,445	+		Ga0059261_3159	0.26	+0.8
3,298,446	-		Ga0059261_3159	0.27	-1.2
3,298,446	-		Ga0059261_3159	0.27	-1.8
3,298,446	-		Ga0059261_3159	0.27	-1.7