Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2965

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,080,121	+		Ga0059261_2964	0.45	+0.2
3,080,121	+		Ga0059261_2964	0.45	-0.3
3,080,121	+		Ga0059261_2964	0.45	+1.2
3,080,121	+		Ga0059261_2964	0.45	-0.2
3,080,121	+		Ga0059261_2964	0.45	-0.4
3,080,122	-		Ga0059261_2964	0.45	+0.4
3,080,122	-		Ga0059261_2964	0.45	-0.5
3,080,122	-		Ga0059261_2964	0.45	+2.0
3,080,122	-		Ga0059261_2964	0.45	+0.1
3,080,122	-		Ga0059261_2964	0.45	+0.4
3,080,122	-		Ga0059261_2964	0.45	-0.2
3,080,122	-		Ga0059261_2964	0.45	+0.8
3,080,123	+		Ga0059261_2964	0.45	-0.7
3,080,123	+		Ga0059261_2964	0.45	-1.8
3,080,123	+		Ga0059261_2964	0.45	-1.1
3,080,123	+		Ga0059261_2964	0.45	+0.1
3,080,123	+		Ga0059261_2964	0.45	-0.8
3,080,123	+		Ga0059261_2964	0.45	-0.3
3,080,123	+		Ga0059261_2964	0.45	+0.1
3,080,123	+		Ga0059261_2964	0.45	+0.1
3,080,123	+		Ga0059261_2964	0.45	+0.6
3,080,123	+		Ga0059261_2964	0.45	-1.1
3,080,124	-		Ga0059261_2964	0.45	-0.3
3,080,124	-		Ga0059261_2964	0.45	-0.5
3,080,124	-		Ga0059261_2964	0.45	+0.2
3,080,124	-		Ga0059261_2964	0.45	-0.4
3,080,124	-		Ga0059261_2964	0.45	-0.9
3,080,124	-		Ga0059261_2964	0.45	+0.5
3,080,124	-		Ga0059261_2964	0.45	+0.1
3,080,124	-		Ga0059261_2964	0.45	+1.1
3,080,124	-		Ga0059261_2964	0.45	+0.5
3,080,124	-		Ga0059261_2964	0.45	-0.1
3,080,124	-		Ga0059261_2964	0.45	-0.4
3,080,124	-		Ga0059261_2964	0.45	-0.0
3,080,266	+		Ga0059261_2964	0.54	-0.7
3,080,266	+		Ga0059261_2964	0.54	+0.7
3,080,267	-		Ga0059261_2964	0.54	-1.1
3,080,267	-		Ga0059261_2964	0.54	-0.5
3,080,286	-		Ga0059261_2964	0.55	+0.2
3,080,501	+		Ga0059261_2964	0.69	+1.2
3,080,502	-		Ga0059261_2964	0.69	-0.2
3,080,502	-		Ga0059261_2964	0.69	-0.8
3,080,507	+		Ga0059261_2964	0.69	-0.1
3,080,507	+		Ga0059261_2964	0.69	+0.2
3,080,507	+		Ga0059261_2964	0.69	-0.3
3,080,507	+		Ga0059261_2964	0.69	-0.4
3,080,612	+		Ga0059261_2964	0.76	-0.1
3,080,612	+		Ga0059261_2964	0.76	-0.0
3,080,613	-		Ga0059261_2964	0.76	-0.3
3,080,630	+		Ga0059261_2964	0.77	-0.6
3,080,630	+		Ga0059261_2964	0.77	-0.4
3,080,630	+		Ga0059261_2964	0.77	+0.2
3,080,631	-		Ga0059261_2964	0.77	-0.3
3,080,631	-		Ga0059261_2964	0.77	+1.3
3,080,814	+		Ga0059261_2964	0.89	-0.3
3,080,814	+		Ga0059261_2964	0.89	-2.2
3,080,814	+		Ga0059261_2964	0.89	+1.3
3,080,814	+		Ga0059261_2964	0.89	-0.1
3,080,815	-				-0.1
3,080,815	-		Ga0059261_2964	0.89	-0.3
3,080,815	-		Ga0059261_2964	0.89	-0.4
3,080,825	+				-0.7
3,080,825	+				+0.3
3,081,159	+		Ga0059261_2965	0.17	-0.4
3,081,159	+		Ga0059261_2965	0.17	-0.5
3,081,160	-		Ga0059261_2965	0.17	+0.3
3,081,219	+		Ga0059261_2965	0.23	-0.8
3,081,220	-		Ga0059261_2965	0.23	+0.1
3,081,495	+		Ga0059261_2965	0.50	+0.2
3,081,495	+		Ga0059261_2965	0.50	-0.0
3,081,496	-		Ga0059261_2965	0.50	+0.3
3,081,687	+		Ga0059261_2965	0.69	-2.2
3,081,687	+		Ga0059261_2965	0.69	+0.6
3,081,687	+		Ga0059261_2965	0.69	+1.5
3,081,687	+		Ga0059261_2965	0.69	-1.5
3,081,688	-		Ga0059261_2965	0.69	-0.5
3,081,688	-		Ga0059261_2965	0.69	-0.5
3,081,688	-		Ga0059261_2965	0.69	+0.5
3,081,688	-		Ga0059261_2965	0.69	+0.5
3,081,688	-		Ga0059261_2965	0.69	-0.1
3,081,732	+		Ga0059261_2965	0.73	+0.2
3,081,732	+		Ga0059261_2965	0.73	+0.5
3,081,732	+		Ga0059261_2965	0.73	+0.4
3,081,732	+		Ga0059261_2965	0.73	+0.7
3,081,732	+		Ga0059261_2965	0.73	+0.0
3,081,732	+				-0.8
3,081,733	-		Ga0059261_2965	0.73	+0.5
3,081,756	+		Ga0059261_2965	0.76	-0.2
3,081,756	+		Ga0059261_2965	0.76	-1.2
3,081,989	-				+0.1
3,082,075	+				+0.2
3,082,075	+				-1.9
3,082,075	+				-1.0
3,082,075	+				-0.0
3,082,075	+				+0.2
3,082,075	+				+0.7
3,082,075	+				-1.1
3,082,075	+				+0.5
3,082,075	+				+0.2
3,082,076	-				-0.9
3,082,076	-				-0.8
3,082,076	-				-0.1
3,082,076	-				-0.4
3,082,076	-				+1.1
3,082,076	-				+0.9
3,082,217	+				-1.3
3,082,218	-		Ga0059261_2966	0.25	-0.1
3,082,218	-		Ga0059261_2966	0.25	+0.3
3,082,219	+		Ga0059261_2966	0.26	-0.4
3,082,220	-		Ga0059261_2966	0.26	+0.9
3,082,220	-		Ga0059261_2966	0.26	+0.3
3,082,220	-		Ga0059261_2966	0.26	-0.2
3,082,220	-		Ga0059261_2966	0.26	+0.6
3,082,315	+		Ga0059261_2966	0.38	+0.4
3,082,316	-		Ga0059261_2966	0.38	+0.7
3,082,316	-		Ga0059261_2966	0.38	+0.5
3,082,316	-		Ga0059261_2966	0.38	-0.3
3,082,316	-		Ga0059261_2966	0.38	+0.2
3,082,316	-		Ga0059261_2966	0.38	-0.6
3,082,804	-				-0.7
3,082,804	-				-0.3
3,082,840	+				-0.4
3,082,840	+				+1.7
3,082,840	+				-0.1
3,082,841	-				-0.4
3,082,841	-				+1.6
3,082,841	-				+0.0
3,082,841	-				-1.0
3,082,842	+				+1.3
3,082,842	+				-0.1
3,082,842	+				+0.6
3,082,842	+				+0.5
3,082,842	+				+0.6
3,082,843	-				-0.4
3,082,843	-				+0.4
3,082,843	-				-1.0
3,082,843	-				-0.7
3,082,843	-				-0.2
3,082,843	-				-0.2
3,082,843	-				-0.5
3,082,881	+				-0.7
3,082,881	+				+0.0
3,082,881	+				-1.0
3,082,881	+				-1.4
3,082,881	+				+0.2
3,082,881	+				-0.5
3,082,881	+				-0.3
3,082,881	+				+0.2
3,082,881	+				-1.3
3,082,881	+				-0.0
3,082,881	+				-0.6
3,082,881	+				+0.1
3,082,882	-				-0.4
3,082,882	-				-0.6
3,082,882	-				-0.2
3,082,882	-				-0.3
3,082,903	+		Ga0059261_2967	0.12	+0.0
3,082,903	+		Ga0059261_2967	0.12	+0.1
3,082,904	-		Ga0059261_2967	0.12	-0.5
3,082,904	-		Ga0059261_2967	0.12	-1.0