Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2828

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
2,937,280	+		Ga0059261_2827	0.55	+0.6
2,937,281	-		Ga0059261_2827	0.55	-0.1
2,937,427	+		Ga0059261_2827	0.62	+0.1
2,937,515	+		Ga0059261_2827	0.66	-0.7
2,937,515	+		Ga0059261_2827	0.66	+0.7
2,937,515	+		Ga0059261_2827	0.66	-0.8
2,937,515	+		Ga0059261_2827	0.66	-0.6
2,937,516	-		Ga0059261_2827	0.66	+0.3
2,937,516	-		Ga0059261_2827	0.66	-0.7
2,937,516	-		Ga0059261_2827	0.66	-0.7
2,937,791	-		Ga0059261_2827	0.80	+0.1
2,937,791	-		Ga0059261_2827	0.80	+0.1
2,937,864	+				-0.2
2,937,949	+		Ga0059261_2827	0.87	-0.0
2,937,950	-		Ga0059261_2827	0.87	+1.8
2,938,027	+				+0.6
2,938,027	+				-0.2
2,938,028	-				-0.9
2,938,028	-				-0.4
2,938,095	+				+0.1
2,938,095	+				+0.5
2,938,096	-				+0.2
2,938,250	-				-0.1
2,938,268	+				+0.1
2,938,365	+		Ga0059261_2828	0.12	-0.5
2,938,365	+		Ga0059261_2828	0.12	-0.7
2,938,365	+		Ga0059261_2828	0.12	+0.1
2,938,365	+		Ga0059261_2828	0.12	+0.5
2,938,365	+		Ga0059261_2828	0.12	+0.5
2,938,366	-		Ga0059261_2828	0.12	+0.2
2,938,366	-		Ga0059261_2828	0.12	-0.6
2,938,366	-		Ga0059261_2828	0.12	+0.7
2,938,366	-		Ga0059261_2828	0.12	+0.3
2,938,366	-		Ga0059261_2828	0.12	+0.4
2,938,366	-		Ga0059261_2828	0.12	-0.3
2,938,366	-		Ga0059261_2828	0.12	-0.2
2,938,366	-		Ga0059261_2828	0.12	-0.1
2,938,519	+		Ga0059261_2828	0.25	-0.4
2,938,520	-		Ga0059261_2828	0.25	+0.1
2,938,520	-		Ga0059261_2828	0.25	-0.2
2,938,700	+		Ga0059261_2828	0.40	+0.0
2,938,700	+		Ga0059261_2828	0.40	+1.4
2,938,700	+		Ga0059261_2828	0.40	-0.6
2,938,700	+		Ga0059261_2828	0.40	+0.5
2,938,701	-		Ga0059261_2828	0.40	-1.0
2,938,719	+		Ga0059261_2828	0.41	+0.4
2,938,719	+		Ga0059261_2828	0.41	+0.1
2,938,719	+		Ga0059261_2828	0.41	+0.7
2,938,719	+		Ga0059261_2828	0.41	+0.3
2,938,720	-		Ga0059261_2828	0.41	-1.0
2,938,877	+		Ga0059261_2828	0.54	+0.0
2,938,877	+		Ga0059261_2828	0.54	-0.1
2,938,878	-		Ga0059261_2828	0.55	+0.1
2,938,878	-		Ga0059261_2828	0.55	+0.2
2,938,890	+		Ga0059261_2828	0.56	+1.0
2,938,891	-		Ga0059261_2828	0.56	-0.4
2,938,934	+		Ga0059261_2828	0.59	-0.0
2,938,935	-		Ga0059261_2828	0.59	+0.4
2,938,943	+		Ga0059261_2828	0.60	+0.1
2,938,944	-		Ga0059261_2828	0.60	-0.5
2,938,944	-		Ga0059261_2828	0.60	+1.0
2,939,126	+		Ga0059261_2828	0.75	-0.0
2,939,126	+		Ga0059261_2828	0.75	+0.2
2,939,126	+		Ga0059261_2828	0.75	+0.3
2,939,127	-		Ga0059261_2828	0.75	+0.6
2,939,127	-		Ga0059261_2828	0.75	+0.2
2,939,127	-		Ga0059261_2828	0.75	-0.3
2,939,127	-		Ga0059261_2828	0.75	+0.1
2,939,127	-				+0.8
2,939,127	-		Ga0059261_2828	0.75	+0.5
2,939,127	-		Ga0059261_2828	0.75	-1.4
2,939,171	+		Ga0059261_2828	0.79	+0.3
2,939,171	+		Ga0059261_2828	0.79	-1.2
2,939,171	+		Ga0059261_2828	0.79	-0.5
2,939,172	-		Ga0059261_2828	0.79	-2.2
2,939,172	-		Ga0059261_2828	0.79	-0.8
2,939,172	-		Ga0059261_2828	0.79	-0.7
2,939,172	-		Ga0059261_2828	0.79	+0.1
2,939,249	+		Ga0059261_2828	0.85	+0.0
2,939,250	-		Ga0059261_2828	0.85	-0.1
2,939,250	-		Ga0059261_2828	0.85	+0.4
2,939,250	-		Ga0059261_2828	0.85	-0.3
2,939,276	+		Ga0059261_2828	0.87	-0.3
2,939,276	+		Ga0059261_2828	0.87	-0.8
2,939,276	+		Ga0059261_2828	0.87	+0.1
2,939,277	-		Ga0059261_2828	0.88	-0.8
2,939,277	-		Ga0059261_2828	0.88	-1.0
2,939,277	-		Ga0059261_2828	0.88	+0.4
2,939,288	+		Ga0059261_2828	0.88	+0.2
2,939,289	-		Ga0059261_2828	0.89	-1.0
2,939,289	-		Ga0059261_2828	0.89	+0.2
2,939,289	-		Ga0059261_2828	0.89	+0.4
2,939,289	-		Ga0059261_2828	0.89	-0.9
2,939,289	-		Ga0059261_2828	0.89	-0.3
2,939,289	-		Ga0059261_2828	0.89	+0.2
2,939,428	+				-0.0
2,939,428	+				+0.1
2,939,428	+				+0.4
2,939,428	+				-0.9
2,939,429	-				-0.9
2,939,429	-				-0.6
2,939,429	-				-0.4
2,939,429	-				-0.2
2,939,429	-				+0.1
2,939,443	+				-0.8
2,939,443	+				-0.1
2,939,444	-				-0.3
2,939,467	+				+0.9
2,939,467	+				+0.1
2,939,467	+				-0.5
2,939,467	+				-1.0
2,939,467	+				+0.3
2,939,468	-				+0.4
2,939,472	+				-0.3
2,939,473	-				-0.6
2,939,473	-				-1.0
2,939,473	-				-0.5
2,939,584	+		Ga0059261_2829	0.14	+0.0
2,939,584	+		Ga0059261_2829	0.14	-0.1
2,939,584	+		Ga0059261_2829	0.14	+0.6
2,939,584	+		Ga0059261_2829	0.14	-0.6
2,939,585	-		Ga0059261_2829	0.14	-0.4
2,939,585	-		Ga0059261_2829	0.14	-0.3
2,939,585	-		Ga0059261_2829	0.14	+0.5
2,939,590	+		Ga0059261_2829	0.15	-0.1
2,939,590	+		Ga0059261_2829	0.15	-0.5
2,939,590	+		Ga0059261_2829	0.15	+0.5
2,939,590	+		Ga0059261_2829	0.15	-0.5
2,939,590	+		Ga0059261_2829	0.15	-0.4
2,939,590	+		Ga0059261_2829	0.15	+0.6
2,939,591	-		Ga0059261_2829	0.15	+0.6
2,939,591	-		Ga0059261_2829	0.15	+0.1
2,939,591	-		Ga0059261_2829	0.15	+0.1
2,939,591	-		Ga0059261_2829	0.15	-1.2
2,939,591	-		Ga0059261_2829	0.15	+0.5
2,939,591	-		Ga0059261_2829	0.15	+1.0
2,939,626	+		Ga0059261_2829	0.18	+0.2
2,939,626	+		Ga0059261_2829	0.18	-0.1
2,939,626	+		Ga0059261_2829	0.18	+0.1
2,939,626	+		Ga0059261_2829	0.18	-0.4
2,939,626	+		Ga0059261_2829	0.18	-0.3
2,939,626	+				+1.8
2,939,627	-		Ga0059261_2829	0.18	-0.3
2,939,627	-		Ga0059261_2829	0.18	+0.0
2,939,627	-		Ga0059261_2829	0.18	-0.4
2,939,627	-		Ga0059261_2829	0.18	+0.5
2,939,707	+		Ga0059261_2829	0.26	-0.1
2,939,707	+		Ga0059261_2829	0.26	+0.2
2,939,707	+		Ga0059261_2829	0.26	-0.1
2,939,707	+		Ga0059261_2829	0.26	+0.2
2,939,708	-		Ga0059261_2829	0.26	-0.5
2,939,708	-		Ga0059261_2829	0.26	-0.6
2,939,782	+		Ga0059261_2829	0.33	-0.4
2,939,782	+		Ga0059261_2829	0.33	+1.1
2,939,782	+		Ga0059261_2829	0.33	-1.4
2,939,782	+		Ga0059261_2829	0.33	+0.9
2,939,783	-		Ga0059261_2829	0.33	-0.9
2,939,783	-		Ga0059261_2829	0.33	+0.6
2,939,783	-		Ga0059261_2829	0.33	-0.9
2,940,391	+		Ga0059261_2829	0.88	-0.3
2,940,391	+				+0.8
2,940,391	+		Ga0059261_2829	0.88	+0.3
2,940,392	-		Ga0059261_2829	0.88	-0.3
2,940,392	-		Ga0059261_2829	0.88	-0.1
2,940,403	+		Ga0059261_2829	0.89	-0.5
2,940,403	+		Ga0059261_2829	0.89	+0.2
2,940,403	+		Ga0059261_2829	0.89	-0.2
2,940,403	+		Ga0059261_2829	0.89	-0.5
2,940,403	+		Ga0059261_2829	0.89	+0.2
2,940,404	-		Ga0059261_2829	0.89	-0.8
2,940,404	-		Ga0059261_2829	0.89	-0.4
2,940,404	-		Ga0059261_2829	0.89	+0.1
2,940,404	-		Ga0059261_2829	0.89	-1.4
2,940,404	-		Ga0059261_2829	0.89	-1.0
2,940,404	-		Ga0059261_2829	0.89	+0.3