Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2261 and Ga0059261_2262 are separated by 80 nucleotides Ga0059261_2262 and Ga0059261_2263 overlap by 4 nucleotides Ga0059261_2263 and Ga0059261_2264 are separated by 125 nucleotides
Ga0059261_2261: Ga0059261_2261 - ATP-dependent DNA helicase RecQ, at 2,363,581 to 2,365,350
_2261
Ga0059261_2262: Ga0059261_2262 - Predicted acetyltransferase, at 2,365,431 to 2,365,721
_2262
Ga0059261_2263: Ga0059261_2263 - ATP phosphoribosyltransferase involved in histidine biosynthesis, at 2,365,718 to 2,366,809
_2263
Ga0059261_2264: Ga0059261_2264 - D-3-phosphoglycerate dehydrogenase, at 2,366,935 to 2,368,512
_2264
Position (kb)
2365
2366
2367 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2364.750 kb on + strand, within Ga0059261_2261 at 2364.825 kb on + strand, within Ga0059261_2261 at 2364.825 kb on + strand, within Ga0059261_2261 at 2364.826 kb on - strand, within Ga0059261_2261 at 2364.853 kb on + strand, within Ga0059261_2261 at 2364.854 kb on - strand, within Ga0059261_2261 at 2364.902 kb on + strand, within Ga0059261_2261 at 2364.903 kb on - strand, within Ga0059261_2261 at 2365.028 kb on + strand, within Ga0059261_2261 at 2365.028 kb on + strand, within Ga0059261_2261 at 2365.029 kb on - strand, within Ga0059261_2261 at 2365.029 kb on - strand, within Ga0059261_2261 at 2365.029 kb on - strand, within Ga0059261_2261 at 2365.029 kb on - strand, within Ga0059261_2261 at 2365.211 kb on + strand at 2365.211 kb on + strand at 2365.211 kb on + strand at 2365.211 kb on + strand at 2365.211 kb on + strand at 2365.212 kb on - strand at 2365.212 kb on - strand at 2365.212 kb on - strand at 2365.212 kb on - strand at 2365.360 kb on + strand at 2365.360 kb on + strand at 2365.360 kb on + strand at 2365.360 kb on + strand at 2365.360 kb on + strand at 2365.360 kb on + strand at 2365.360 kb on + strand at 2365.361 kb on - strand at 2365.361 kb on - strand at 2365.361 kb on - strand at 2365.361 kb on - strand at 2365.362 kb on + strand at 2365.362 kb on + strand at 2365.362 kb on + strand at 2365.396 kb on + strand at 2365.397 kb on - strand at 2365.397 kb on - strand at 2365.473 kb on + strand, within Ga0059261_2262 at 2365.474 kb on - strand, within Ga0059261_2262 at 2365.512 kb on + strand at 2365.512 kb on + strand, within Ga0059261_2262 at 2365.512 kb on + strand, within Ga0059261_2262 at 2365.512 kb on + strand, within Ga0059261_2262 at 2365.513 kb on - strand, within Ga0059261_2262 at 2365.618 kb on + strand, within Ga0059261_2262 at 2365.618 kb on + strand, within Ga0059261_2262 at 2365.618 kb on + strand, within Ga0059261_2262 at 2365.618 kb on + strand, within Ga0059261_2262 at 2365.619 kb on - strand, within Ga0059261_2262 at 2365.619 kb on - strand, within Ga0059261_2262 at 2365.619 kb on - strand, within Ga0059261_2262 at 2365.619 kb on - strand, within Ga0059261_2262 at 2365.632 kb on - strand, within Ga0059261_2262 at 2365.632 kb on - strand, within Ga0059261_2262 at 2365.632 kb on - strand, within Ga0059261_2262 at 2365.632 kb on - strand, within Ga0059261_2262 at 2365.668 kb on + strand, within Ga0059261_2262 at 2365.668 kb on + strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.669 kb on - strand, within Ga0059261_2262 at 2365.671 kb on - strand, within Ga0059261_2262 at 2365.885 kb on + strand, within Ga0059261_2263 at 2365.885 kb on + strand, within Ga0059261_2263 at 2365.886 kb on - strand, within Ga0059261_2263 at 2365.926 kb on - strand, within Ga0059261_2263 at 2365.926 kb on - strand, within Ga0059261_2263 at 2365.968 kb on + strand, within Ga0059261_2263 at 2365.968 kb on + strand, within Ga0059261_2263 at 2365.968 kb on + strand, within Ga0059261_2263 at 2365.968 kb on + strand, within Ga0059261_2263 at 2365.968 kb on + strand, within Ga0059261_2263 at 2365.968 kb on + strand, within Ga0059261_2263 at 2365.968 kb on + strand, within Ga0059261_2263 at 2365.968 kb on + strand, within Ga0059261_2263 at 2365.969 kb on - strand, within Ga0059261_2263 at 2365.969 kb on - strand, within Ga0059261_2263 at 2366.038 kb on - strand, within Ga0059261_2263 at 2366.038 kb on - strand, within Ga0059261_2263 at 2366.502 kb on + strand, within Ga0059261_2263 at 2366.502 kb on + strand, within Ga0059261_2263 at 2366.503 kb on - strand, within Ga0059261_2263 at 2366.503 kb on - strand, within Ga0059261_2263 at 2366.503 kb on - strand, within Ga0059261_2263 at 2366.703 kb on + strand at 2366.703 kb on + strand at 2366.704 kb on - strand at 2366.704 kb on - strand at 2366.704 kb on - strand at 2366.709 kb on + strand at 2366.709 kb on + strand at 2366.709 kb on + strand at 2366.709 kb on + strand at 2366.709 kb on + strand at 2366.709 kb on + strand at 2366.710 kb on - strand at 2366.710 kb on - strand at 2366.710 kb on - strand at 2366.710 kb on - strand at 2366.809 kb on + strand at 2366.809 kb on + strand at 2366.809 kb on + strand at 2366.809 kb on + strand at 2366.809 kb on + strand at 2366.809 kb on + strand at 2366.810 kb on - strand at 2366.810 kb on - strand at 2366.936 kb on + strand at 2366.937 kb on - strand at 2367.031 kb on + strand at 2367.031 kb on + strand at 2367.032 kb on - strand at 2367.032 kb on - strand at 2367.078 kb on + strand at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.149 kb on + strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.150 kb on - strand, within Ga0059261_2264 at 2367.531 kb on + strand, within Ga0059261_2264 at 2367.531 kb on + strand, within Ga0059261_2264 at 2367.531 kb on + strand, within Ga0059261_2264 at 2367.531 kb on + strand, within Ga0059261_2264 at 2367.531 kb on + strand, within Ga0059261_2264 at 2367.531 kb on + strand, within Ga0059261_2264 at 2367.532 kb on - strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.533 kb on + strand, within Ga0059261_2264 at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.534 kb on - strand at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.534 kb on - strand, within Ga0059261_2264 at 2367.611 kb on + strand, within Ga0059261_2264 at 2367.611 kb on + strand, within Ga0059261_2264 at 2367.612 kb on - strand, within Ga0059261_2264 at 2367.612 kb on - strand, within Ga0059261_2264 at 2367.612 kb on - strand, within Ga0059261_2264 at 2367.612 kb on - strand, within Ga0059261_2264
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 2,364,750 + Ga0059261_2261 0.66 -0.7 2,364,825 + Ga0059261_2261 0.70 +0.6 2,364,825 + Ga0059261_2261 0.70 -0.8 2,364,826 - Ga0059261_2261 0.70 -0.3 2,364,853 + Ga0059261_2261 0.72 +0.0 2,364,854 - Ga0059261_2261 0.72 -0.7 2,364,902 + Ga0059261_2261 0.75 -0.2 2,364,903 - Ga0059261_2261 0.75 -0.5 2,365,028 + Ga0059261_2261 0.82 -1.1 2,365,028 + Ga0059261_2261 0.82 +0.5 2,365,029 - Ga0059261_2261 0.82 +0.6 2,365,029 - Ga0059261_2261 0.82 -1.6 2,365,029 - Ga0059261_2261 0.82 +0.4 2,365,029 - Ga0059261_2261 0.82 -1.5 2,365,211 + +0.1 2,365,211 + +0.1 2,365,211 + +0.1 2,365,211 + -0.7 2,365,211 + +0.3 2,365,212 - -0.5 2,365,212 - -0.7 2,365,212 - -0.4 2,365,212 - -0.1 2,365,360 + -0.6 2,365,360 + +0.1 2,365,360 + -0.2 2,365,360 + -1.3 2,365,360 + +1.2 2,365,360 + +0.2 2,365,360 + +1.1 2,365,361 - +0.6 2,365,361 - +0.1 2,365,361 - -0.1 2,365,361 - +2.4 2,365,362 + +0.2 2,365,362 + +0.3 2,365,362 + -0.4 2,365,396 + -0.2 2,365,397 - +1.5 2,365,397 - +0.5 2,365,473 + Ga0059261_2262 0.14 -0.6 2,365,474 - Ga0059261_2262 0.15 -1.1 2,365,512 + +1.5 2,365,512 + Ga0059261_2262 0.28 +0.5 2,365,512 + Ga0059261_2262 0.28 -0.8 2,365,512 + Ga0059261_2262 0.28 -0.6 2,365,513 - Ga0059261_2262 0.28 -0.1 2,365,618 + Ga0059261_2262 0.64 +1.7 2,365,618 + Ga0059261_2262 0.64 +0.2 2,365,618 + Ga0059261_2262 0.64 -0.3 2,365,618 + Ga0059261_2262 0.64 +0.3 2,365,619 - Ga0059261_2262 0.65 +0.5 2,365,619 - Ga0059261_2262 0.65 -0.9 2,365,619 - Ga0059261_2262 0.65 +0.9 2,365,619 - Ga0059261_2262 0.65 +0.9 2,365,632 - Ga0059261_2262 0.69 +0.5 2,365,632 - Ga0059261_2262 0.69 -1.5 2,365,632 - Ga0059261_2262 0.69 -0.2 2,365,632 - Ga0059261_2262 0.69 +0.4 2,365,668 + Ga0059261_2262 0.81 -1.2 2,365,668 + Ga0059261_2262 0.81 +0.1 2,365,669 - Ga0059261_2262 0.82 -0.4 2,365,669 - Ga0059261_2262 0.82 -0.1 2,365,669 - Ga0059261_2262 0.82 -1.2 2,365,669 - Ga0059261_2262 0.82 -0.4 2,365,669 - Ga0059261_2262 0.82 -0.1 2,365,669 - Ga0059261_2262 0.82 -0.2 2,365,669 - Ga0059261_2262 0.82 -0.0 2,365,669 - Ga0059261_2262 0.82 -0.1 2,365,669 - Ga0059261_2262 0.82 -0.3 2,365,669 - Ga0059261_2262 0.82 +0.3 2,365,671 - Ga0059261_2262 0.82 -0.3 2,365,885 + Ga0059261_2263 0.15 -2.5 2,365,885 + Ga0059261_2263 0.15 -4.4 2,365,886 - Ga0059261_2263 0.15 -3.3 2,365,926 - Ga0059261_2263 0.19 -2.2 2,365,926 - Ga0059261_2263 0.19 -3.5 2,365,968 + Ga0059261_2263 0.23 -3.0 2,365,968 + Ga0059261_2263 0.23 -1.6 2,365,968 + Ga0059261_2263 0.23 -3.5 2,365,968 + Ga0059261_2263 0.23 -0.9 2,365,968 + Ga0059261_2263 0.23 -2.4 2,365,968 + Ga0059261_2263 0.23 -3.9 2,365,968 + Ga0059261_2263 0.23 -2.4 2,365,968 + Ga0059261_2263 0.23 -2.6 2,365,969 - Ga0059261_2263 0.23 -2.1 2,365,969 - Ga0059261_2263 0.23 -3.8 2,366,038 - Ga0059261_2263 0.29 -3.6 2,366,038 - Ga0059261_2263 0.29 -3.3 2,366,502 + Ga0059261_2263 0.72 -3.1 2,366,502 + Ga0059261_2263 0.72 -2.7 2,366,503 - Ga0059261_2263 0.72 -1.7 2,366,503 - Ga0059261_2263 0.72 -3.8 2,366,503 - Ga0059261_2263 0.72 -1.4 2,366,703 + -4.0 2,366,703 + -1.7 2,366,704 - -0.9 2,366,704 - -4.2 2,366,704 - -2.0 2,366,709 + -4.9 2,366,709 + -1.4 2,366,709 + -4.7 2,366,709 + -1.3 2,366,709 + -3.2 2,366,709 + -4.3 2,366,710 - -4.6 2,366,710 - -4.1 2,366,710 - -2.9 2,366,710 - -3.1 2,366,809 + -2.0 2,366,809 + -0.8 2,366,809 + -1.2 2,366,809 + -2.3 2,366,809 + -2.6 2,366,809 + -0.3 2,366,810 - +0.3 2,366,810 - +0.1 2,366,936 + -1.1 2,366,937 - -0.1 2,367,031 + -1.8 2,367,031 + -0.4 2,367,032 - -2.2 2,367,032 - -1.6 2,367,078 + -0.1 2,367,149 + Ga0059261_2264 0.14 -1.6 2,367,149 + Ga0059261_2264 0.14 -2.8 2,367,149 + Ga0059261_2264 0.14 -0.6 2,367,149 + Ga0059261_2264 0.14 -2.6 2,367,149 + Ga0059261_2264 0.14 -3.3 2,367,149 + Ga0059261_2264 0.14 -2.1 2,367,149 + Ga0059261_2264 0.14 -3.6 2,367,149 + Ga0059261_2264 0.14 -2.9 2,367,149 + Ga0059261_2264 0.14 -2.4 2,367,149 + Ga0059261_2264 0.14 -1.6 2,367,149 + Ga0059261_2264 0.14 -1.5 2,367,149 + Ga0059261_2264 0.14 -3.3 2,367,149 + Ga0059261_2264 0.14 -1.6 2,367,150 - Ga0059261_2264 0.14 -3.4 2,367,150 - Ga0059261_2264 0.14 -3.3 2,367,150 - Ga0059261_2264 0.14 -3.5 2,367,150 - Ga0059261_2264 0.14 -2.4 2,367,150 - Ga0059261_2264 0.14 -1.9 2,367,150 - Ga0059261_2264 0.14 -4.0 2,367,150 - Ga0059261_2264 0.14 -2.4 2,367,150 - Ga0059261_2264 0.14 -2.9 2,367,150 - Ga0059261_2264 0.14 -0.1 2,367,150 - Ga0059261_2264 0.14 -3.1 2,367,150 - Ga0059261_2264 0.14 -2.7 2,367,531 + Ga0059261_2264 0.38 -1.2 2,367,531 + Ga0059261_2264 0.38 -4.3 2,367,531 + Ga0059261_2264 0.38 -4.2 2,367,531 + Ga0059261_2264 0.38 -3.6 2,367,531 + Ga0059261_2264 0.38 -2.1 2,367,531 + Ga0059261_2264 0.38 -1.4 2,367,532 - Ga0059261_2264 0.38 -5.1 2,367,533 + Ga0059261_2264 0.38 -1.5 2,367,533 + Ga0059261_2264 0.38 -2.4 2,367,533 + Ga0059261_2264 0.38 -1.4 2,367,533 + Ga0059261_2264 0.38 -1.5 2,367,533 + Ga0059261_2264 0.38 -2.2 2,367,533 + Ga0059261_2264 0.38 -3.2 2,367,533 + Ga0059261_2264 0.38 -4.2 2,367,533 + Ga0059261_2264 0.38 -3.5 2,367,533 + Ga0059261_2264 0.38 -2.7 2,367,534 - Ga0059261_2264 0.38 -3.4 2,367,534 - Ga0059261_2264 0.38 -1.5 2,367,534 - -0.4 2,367,534 - Ga0059261_2264 0.38 -1.8 2,367,534 - Ga0059261_2264 0.38 -2.6 2,367,534 - Ga0059261_2264 0.38 +0.4 2,367,534 - Ga0059261_2264 0.38 -3.0 2,367,534 - Ga0059261_2264 0.38 -1.8 2,367,534 - Ga0059261_2264 0.38 -5.2 2,367,534 - Ga0059261_2264 0.38 -2.8 2,367,611 + Ga0059261_2264 0.43 -2.2 2,367,611 + Ga0059261_2264 0.43 -0.9 2,367,612 - Ga0059261_2264 0.43 -3.8 2,367,612 - Ga0059261_2264 0.43 -2.5 2,367,612 - Ga0059261_2264 0.43 -4.2 2,367,612 - Ga0059261_2264 0.43 -3.1
Or see this region's nucleotide sequence