Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1798

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,907,752	+		Ga0059261_1797	0.34	-2.5
1,907,753	-		Ga0059261_1797	0.34	-5.3
1,907,771	-		Ga0059261_1797	0.35	-2.7
1,907,771	-		Ga0059261_1797	0.35	-2.8
1,907,785	+		Ga0059261_1797	0.36	-3.8
1,907,785	+		Ga0059261_1797	0.36	-3.5
1,907,785	+		Ga0059261_1797	0.36	-2.4
1,907,785	+		Ga0059261_1797	0.36	-0.9
1,907,785	+		Ga0059261_1797	0.36	-4.5
1,907,785	+		Ga0059261_1797	0.36	-2.4
1,907,785	+		Ga0059261_1797	0.36	-1.5
1,907,786	-		Ga0059261_1797	0.36	-3.8
1,907,786	-		Ga0059261_1797	0.36	-5.0
1,907,786	-		Ga0059261_1797	0.36	-2.5
1,907,786	-		Ga0059261_1797	0.36	-2.2
1,907,821	+		Ga0059261_1797	0.38	-2.7
1,907,821	+		Ga0059261_1797	0.38	-2.8
1,907,821	+		Ga0059261_1797	0.38	-2.7
1,907,822	-		Ga0059261_1797	0.39	-3.4
1,907,822	-		Ga0059261_1797	0.39	-2.3
1,907,822	-		Ga0059261_1797	0.39	-2.9
1,907,986	+		Ga0059261_1797	0.50	-2.6
1,907,987	-		Ga0059261_1797	0.50	-3.7
1,907,987	-		Ga0059261_1797	0.50	-4.2
1,907,987	-		Ga0059261_1797	0.50	-2.1
1,907,987	-		Ga0059261_1797	0.50	-2.1
1,908,049	+		Ga0059261_1797	0.54	-2.8
1,908,050	-		Ga0059261_1797	0.54	-2.8
1,908,218	-		Ga0059261_1797	0.66	-1.9
1,908,218	-		Ga0059261_1797	0.66	-2.0
1,908,472	+		Ga0059261_1797	0.83	-4.3
1,908,472	+		Ga0059261_1797	0.83	-1.5
1,908,472	+		Ga0059261_1797	0.83	-1.1
1,908,472	+		Ga0059261_1797	0.83	-3.4
1,908,472	+		Ga0059261_1797	0.83	-3.0
1,908,472	+		Ga0059261_1797	0.83	-3.1
1,908,473	-		Ga0059261_1797	0.83	-3.4
1,908,473	-		Ga0059261_1797	0.83	-3.1
1,908,473	-		Ga0059261_1797	0.83	-3.0
1,908,492	+		Ga0059261_1797	0.84	-1.1
1,908,492	+		Ga0059261_1797	0.84	-3.2
1,908,493	-		Ga0059261_1797	0.84	-1.4
1,908,493	-		Ga0059261_1797	0.84	-3.4
1,908,493	-		Ga0059261_1797	0.84	-3.7
1,908,493	-		Ga0059261_1797	0.84	-3.9
1,908,728	+				-0.5
1,908,729	-				-2.2
1,908,729	-				-2.6
1,908,729	-				-2.8
1,908,729	-				-1.9
1,908,867	+		Ga0059261_1798	0.23	-0.3
1,908,867	+		Ga0059261_1798	0.23	-0.7
1,908,867	+		Ga0059261_1798	0.23	-0.4
1,908,867	+		Ga0059261_1798	0.23	-0.2
1,908,867	+		Ga0059261_1798	0.23	-1.0
1,908,867	+		Ga0059261_1798	0.23	+0.1
1,908,867	+		Ga0059261_1798	0.23	-0.4
1,908,867	+		Ga0059261_1798	0.23	-0.1
1,908,867	+		Ga0059261_1798	0.23	-0.6
1,908,867	+		Ga0059261_1798	0.23	+0.3
1,908,867	+		Ga0059261_1798	0.23	+0.2
1,908,867	+		Ga0059261_1798	0.23	-0.1
1,908,867	+		Ga0059261_1798	0.23	-0.5
1,908,867	+		Ga0059261_1798	0.23	+1.3
1,908,867	+		Ga0059261_1798	0.23	-0.3
1,908,867	+		Ga0059261_1798	0.23	-0.4
1,908,867	+		Ga0059261_1798	0.23	+0.1
1,908,867	+		Ga0059261_1798	0.23	-0.3
1,908,868	-		Ga0059261_1798	0.23	-3.4
1,908,868	-		Ga0059261_1798	0.23	-4.6
1,908,868	-		Ga0059261_1798	0.23	-4.2
1,908,868	-		Ga0059261_1798	0.23	-2.7
1,908,868	-		Ga0059261_1798	0.23	-3.9
1,908,868	-		Ga0059261_1798	0.23	-3.4
1,908,868	-		Ga0059261_1798	0.23	-3.9
1,908,868	-		Ga0059261_1798	0.23	-3.6
1,908,868	-		Ga0059261_1798	0.23	-1.7
1,908,868	-		Ga0059261_1798	0.23	-4.6
1,908,868	-				+0.3
1,908,868	-		Ga0059261_1798	0.23	-0.5
1,908,868	-		Ga0059261_1798	0.23	-3.0
1,908,868	-		Ga0059261_1798	0.23	-2.8
1,908,868	-		Ga0059261_1798	0.23	-4.6
1,908,869	+		Ga0059261_1798	0.23	-1.7
1,908,869	+		Ga0059261_1798	0.23	-0.4
1,908,869	+		Ga0059261_1798	0.23	-0.1
1,908,869	+		Ga0059261_1798	0.23	-0.5
1,908,870	-		Ga0059261_1798	0.23	-4.4
1,908,870	-		Ga0059261_1798	0.23	-3.5
1,908,870	-		Ga0059261_1798	0.23	-2.7
1,908,870	-		Ga0059261_1798	0.23	-1.5
1,908,870	-		Ga0059261_1798	0.23	-2.7
1,909,207	-		Ga0059261_1798	0.76	-0.1
1,909,207	-		Ga0059261_1798	0.76	-3.1
1,909,207	-		Ga0059261_1798	0.76	-1.7
1,909,450	+		Ga0059261_1799	0.17	+0.5
1,909,451	-		Ga0059261_1799	0.17	-3.6
1,909,704	-		Ga0059261_1799	0.60	-3.7
1,909,884	+				-0.5
1,909,884	+				-0.1
1,909,884	+				+0.6
1,909,884	+				-0.8
1,909,884	+				-0.3
1,909,885	-				-2.4
1,909,885	-				-3.1
1,909,885	-				-3.5
1,909,903	+				-0.5
1,909,974	+				-3.8
1,909,974	+				-2.2
1,909,974	+				-3.4
1,909,974	+				-4.2
1,909,974	+				-3.5
1,909,974	+				-2.5
1,909,974	+				-3.2
1,909,974	+				-3.5
1,909,975	-				-3.1
1,909,975	-				-2.5
1,909,975	-				-1.7
1,910,304	+				-0.1
1,910,304	+				-3.1
1,910,304	+				-3.3
1,910,305	-				-0.7
1,910,305	-				-2.5
1,910,305	-				-1.6
1,910,305	-				-1.7
1,910,313	+				-3.7
1,910,313	+				-1.7
1,910,313	+				-1.1
1,910,313	+				-1.7
1,910,313	+				-3.0
1,910,313	+				-2.7
1,910,313	+				-2.8
1,910,313	+				-3.4
1,910,313	+				-3.4
1,910,313	+				-1.8
1,910,313	+				-1.7
1,910,313	+				-0.5
1,910,313	+				-2.2
1,910,313	+				-3.2
1,910,313	+				-4.7
1,910,313	+				-2.2
1,910,313	+				-3.9
1,910,313	+				-0.7
1,910,314	-				-2.4
1,910,314	-				-4.8
1,910,314	-				-4.6
1,910,314	-				-3.1
1,910,314	-				-2.4
1,910,314	-				-3.4
1,910,314	-				-4.5
1,910,314	-				-4.3
1,910,314	-				-4.2
1,910,314	-				-2.0
1,910,314	-				-2.9
1,910,314	-				-2.8
1,910,314	-				-0.1
1,910,314	-				-4.4
1,910,314	-				-1.7
1,910,314	-				-2.2
1,910,314	-				-1.7
1,910,314	-				-2.7
1,910,314	-				+0.3
1,910,314	-				-1.9
1,910,314	-				-3.4
1,910,314	-				-3.0
1,910,314	-				-2.8
1,910,314	-				-3.8
1,910,314	-				-2.7
1,910,314	-				-2.1
1,910,314	-				-3.5
1,910,314	-				-2.7