Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1388

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,464,162	+		Ga0059261_1386	0.77	+1.0
1,464,163	-		Ga0059261_1386	0.77	-0.2
1,464,163	-		Ga0059261_1386	0.77	-0.3
1,464,192	+		Ga0059261_1386	0.83	+1.0
1,464,192	+		Ga0059261_1386	0.83	+2.1
1,464,192	+		Ga0059261_1386	0.83	+1.1
1,464,192	+		Ga0059261_1386	0.83	+2.8
1,464,193	-		Ga0059261_1386	0.83	+2.1
1,464,193	-		Ga0059261_1386	0.83	-1.2
1,464,193	-		Ga0059261_1386	0.83	+0.3
1,464,193	-		Ga0059261_1386	0.83	+0.4
1,464,193	-				+1.4
1,464,193	-		Ga0059261_1386	0.83	+0.3
1,464,242	+				+1.1
1,464,242	+				-0.3
1,464,242	+				-0.9
1,464,242	+				+0.7
1,464,242	+				+1.1
1,464,243	-				+0.3
1,464,243	-				+0.3
1,464,270	+				+0.5
1,464,352	-				-1.5
1,464,352	-				-3.2
1,464,491	+		Ga0059261_1387	0.15	-0.2
1,464,491	+		Ga0059261_1387	0.15	-0.2
1,464,492	-		Ga0059261_1387	0.15	-0.7
1,464,515	+		Ga0059261_1387	0.18	-0.4
1,464,515	+		Ga0059261_1387	0.18	-0.9
1,464,516	-		Ga0059261_1387	0.18	-1.5
1,464,516	-		Ga0059261_1387	0.18	+0.4
1,464,631	-		Ga0059261_1387	0.32	-1.7
1,464,650	+		Ga0059261_1387	0.34	-0.7
1,464,650	+		Ga0059261_1387	0.34	-0.0
1,464,651	-		Ga0059261_1387	0.34	-0.6
1,464,800	+		Ga0059261_1387	0.52	-0.1
1,464,801	-		Ga0059261_1387	0.52	-0.9
1,464,801	-		Ga0059261_1387	0.52	-1.9
1,464,801	-		Ga0059261_1387	0.52	-0.3
1,464,801	-		Ga0059261_1387	0.52	-0.6
1,464,801	-		Ga0059261_1387	0.52	-0.7
1,464,801	-		Ga0059261_1387	0.52	-1.8
1,464,815	+		Ga0059261_1387	0.54	+0.5
1,464,816	-		Ga0059261_1387	0.54	-0.7
1,464,935	+		Ga0059261_1387	0.68	-1.5
1,464,935	+		Ga0059261_1387	0.68	-0.8
1,464,936	-		Ga0059261_1387	0.68	+0.2
1,464,960	+		Ga0059261_1387	0.71	+0.8
1,464,960	+		Ga0059261_1387	0.71	-0.1
1,464,961	-				+0.8
1,464,961	-		Ga0059261_1387	0.71	+0.5
1,464,961	-		Ga0059261_1387	0.71	-1.1
1,464,961	-		Ga0059261_1387	0.71	+0.2
1,465,134	+				+0.4
1,465,134	+				-0.6
1,465,134	+				-1.0
1,465,134	+				+0.3
1,465,134	+				-0.5
1,465,134	+				-0.6
1,465,134	+				-0.2
1,465,134	+				-0.9
1,465,134	+				+0.0
1,465,135	-				-0.4
1,465,135	-				-0.8
1,465,135	-				-1.5
1,465,135	-				-1.4
1,465,135	-				-1.1
1,465,290	+		Ga0059261_1388	0.11	-0.7
1,465,313	+		Ga0059261_1388	0.13	-1.7
1,465,313	+		Ga0059261_1388	0.13	-1.1
1,465,313	+		Ga0059261_1388	0.13	-1.2
1,465,313	+		Ga0059261_1388	0.13	-0.6
1,465,313	+		Ga0059261_1388	0.13	-1.2
1,465,314	-		Ga0059261_1388	0.13	-3.2
1,465,368	+		Ga0059261_1388	0.17	-1.9
1,465,368	+		Ga0059261_1388	0.17	-0.6
1,465,369	-		Ga0059261_1388	0.17	-0.7
1,465,369	-		Ga0059261_1388	0.17	-0.6
1,465,369	-		Ga0059261_1388	0.17	-2.0
1,465,369	-		Ga0059261_1388	0.17	-1.9
1,465,373	+		Ga0059261_1388	0.18	-1.3
1,465,373	+		Ga0059261_1388	0.18	-2.4
1,465,373	+		Ga0059261_1388	0.18	-0.4
1,465,373	+		Ga0059261_1388	0.18	-0.9
1,465,373	+				+0.8
1,465,373	+		Ga0059261_1388	0.18	-0.5
1,465,373	+		Ga0059261_1388	0.18	-1.3
1,465,374	-		Ga0059261_1388	0.18	-2.3
1,465,374	-		Ga0059261_1388	0.18	-1.0
1,465,374	-		Ga0059261_1388	0.18	-1.5
1,465,457	+		Ga0059261_1388	0.25	-1.1
1,465,541	+		Ga0059261_1388	0.31	-1.5
1,465,541	+		Ga0059261_1388	0.31	-1.9
1,465,541	+		Ga0059261_1388	0.31	-0.9
1,465,541	+		Ga0059261_1388	0.31	-2.0
1,465,541	+		Ga0059261_1388	0.31	-1.5
1,465,541	+		Ga0059261_1388	0.31	-1.6
1,465,541	+		Ga0059261_1388	0.31	-1.1
1,465,541	+				-0.2
1,465,541	+		Ga0059261_1388	0.31	-0.7
1,465,541	+		Ga0059261_1388	0.31	-1.0
1,465,541	+		Ga0059261_1388	0.31	-1.5
1,465,542	-		Ga0059261_1388	0.31	-0.6
1,465,542	-		Ga0059261_1388	0.31	-0.1
1,465,542	-		Ga0059261_1388	0.31	-0.7
1,465,542	-		Ga0059261_1388	0.31	-2.7
1,465,604	+				-1.0
1,465,604	+		Ga0059261_1388	0.36	-1.9
1,465,604	+		Ga0059261_1388	0.36	-1.2
1,465,604	+		Ga0059261_1388	0.36	-1.9
1,465,605	-		Ga0059261_1388	0.36	-0.6
1,465,605	-		Ga0059261_1388	0.36	-0.4
1,465,605	-		Ga0059261_1388	0.36	-1.5
1,465,762	+		Ga0059261_1388	0.49	-2.3
1,465,762	+		Ga0059261_1388	0.49	-1.2
1,465,763	-		Ga0059261_1388	0.49	-1.7
1,465,763	-		Ga0059261_1388	0.49	-3.0
1,465,763	-		Ga0059261_1388	0.49	-1.4
1,465,763	-		Ga0059261_1388	0.49	-0.1
1,465,835	+		Ga0059261_1388	0.55	-0.5
1,465,835	+		Ga0059261_1388	0.55	-1.7
1,465,835	+		Ga0059261_1388	0.55	-0.7
1,465,836	-		Ga0059261_1388	0.55	-1.0
1,465,836	-		Ga0059261_1388	0.55	-1.2
1,465,836	-		Ga0059261_1388	0.55	-1.1
1,466,024	+		Ga0059261_1388	0.70	-0.8
1,466,186	+				+0.2
1,466,189	-		Ga0059261_1388	0.84	-1.4
1,466,214	-		Ga0059261_1388	0.86	-0.5
1,466,238	+		Ga0059261_1388	0.88	-1.8
1,466,238	+		Ga0059261_1388	0.88	-0.9
1,466,239	-		Ga0059261_1388	0.88	-1.3
1,466,239	-		Ga0059261_1388	0.88	-2.6
1,466,239	-		Ga0059261_1388	0.88	-0.8
1,466,239	-		Ga0059261_1388	0.88	-0.9
1,466,239	-		Ga0059261_1388	0.88	-1.8
1,466,277	+				-1.8
1,466,277	+				-1.8
1,466,277	+				-1.3
1,466,277	+				-0.6
1,466,278	-				-0.7
1,466,278	-				-0.7
1,466,278	-				-1.1
1,466,278	-				-0.7
1,466,278	-				-1.3
1,466,649	+		Ga0059261_1389	0.20	+0.5
1,466,932	+		Ga0059261_1389	0.41	-1.4
1,466,932	+		Ga0059261_1389	0.41	-0.4
1,466,932	+		Ga0059261_1389	0.41	+0.8
1,466,933	-		Ga0059261_1389	0.41	+0.2
1,466,933	-		Ga0059261_1389	0.41	+0.3
1,466,959	-				-0.0
1,466,959	-		Ga0059261_1389	0.43	+0.2
1,467,335	+		Ga0059261_1389	0.72	-0.3