Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0723 and Ga0059261_0724 are separated by 167 nucleotides Ga0059261_0724 and Ga0059261_0725 are separated by 70 nucleotides Ga0059261_0725 and Ga0059261_0726 are separated by 238 nucleotides Ga0059261_0726 and Ga0059261_0727 overlap by 4 nucleotides
Ga0059261_0723: Ga0059261_0723 - hypothetical protein, at 756,366 to 756,752
_0723
Ga0059261_0724: Ga0059261_0724 - Acetyltransferase (GNAT) domain, at 756,920 to 757,369
_0724
Ga0059261_0725: Ga0059261_0725 - Fructose-1,6-bisphosphate aldolase, at 757,440 to 758,345
_0725
Ga0059261_0726: Ga0059261_0726 - hypothetical protein, at 758,584 to 758,976
_0726
Ga0059261_0727: Ga0059261_0727 - conserved hypothetical protein, at 758,973 to 759,629
_0727
Position (kb) 757
758
759 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 756.500 kb on + strand, within Ga0059261_0723 at 756.501 kb on - strand, within Ga0059261_0723 at 756.643 kb on + strand, within Ga0059261_0723 at 756.644 kb on - strand, within Ga0059261_0723 at 756.644 kb on - strand, within Ga0059261_0723 at 756.717 kb on + strand at 756.717 kb on + strand at 756.718 kb on - strand at 756.897 kb on + strand at 756.897 kb on + strand at 756.897 kb on + strand at 756.897 kb on + strand at 756.897 kb on + strand at 756.897 kb on + strand at 756.897 kb on + strand at 756.898 kb on - strand at 756.898 kb on - strand at 756.898 kb on - strand at 756.898 kb on - strand at 756.898 kb on - strand at 756.898 kb on - strand at 756.898 kb on - strand at 756.926 kb on + strand at 756.926 kb on + strand at 756.926 kb on + strand at 756.927 kb on - strand at 756.927 kb on - strand at 756.927 kb on - strand at 756.927 kb on - strand at 756.927 kb on - strand at 756.927 kb on - strand at 757.067 kb on + strand, within Ga0059261_0724 at 757.067 kb on + strand, within Ga0059261_0724 at 757.067 kb on + strand, within Ga0059261_0724 at 757.067 kb on + strand, within Ga0059261_0724 at 757.068 kb on - strand, within Ga0059261_0724 at 757.068 kb on - strand, within Ga0059261_0724 at 757.068 kb on - strand, within Ga0059261_0724 at 757.068 kb on - strand, within Ga0059261_0724 at 757.068 kb on - strand, within Ga0059261_0724 at 757.068 kb on - strand, within Ga0059261_0724 at 757.247 kb on + strand, within Ga0059261_0724 at 757.247 kb on + strand, within Ga0059261_0724 at 757.247 kb on + strand, within Ga0059261_0724 at 757.247 kb on + strand, within Ga0059261_0724 at 757.247 kb on + strand, within Ga0059261_0724 at 757.247 kb on + strand, within Ga0059261_0724 at 757.247 kb on + strand, within Ga0059261_0724 at 757.247 kb on + strand at 757.247 kb on + strand, within Ga0059261_0724 at 757.248 kb on - strand, within Ga0059261_0724 at 757.248 kb on - strand, within Ga0059261_0724 at 757.248 kb on - strand, within Ga0059261_0724 at 757.248 kb on - strand, within Ga0059261_0724 at 757.277 kb on + strand, within Ga0059261_0724 at 757.277 kb on + strand, within Ga0059261_0724 at 757.278 kb on - strand, within Ga0059261_0724 at 758.224 kb on + strand, within Ga0059261_0725 at 758.225 kb on - strand, within Ga0059261_0725 at 758.245 kb on + strand at 758.245 kb on + strand, within Ga0059261_0725 at 758.246 kb on - strand, within Ga0059261_0725 at 758.298 kb on - strand at 758.352 kb on + strand at 758.353 kb on - strand at 758.403 kb on + strand at 758.404 kb on - strand at 758.404 kb on - strand at 758.416 kb on + strand at 758.416 kb on + strand at 758.417 kb on - strand at 758.417 kb on - strand at 758.417 kb on - strand at 758.531 kb on - strand at 758.531 kb on - strand at 758.585 kb on + strand at 758.585 kb on + strand at 758.864 kb on + strand, within Ga0059261_0726 at 758.865 kb on - strand, within Ga0059261_0726 at 758.865 kb on - strand, within Ga0059261_0726 at 758.865 kb on - strand, within Ga0059261_0726 at 758.865 kb on - strand, within Ga0059261_0726 at 758.954 kb on + strand at 758.954 kb on + strand at 758.954 kb on + strand at 758.955 kb on - strand at 758.955 kb on - strand at 758.955 kb on - strand at 758.993 kb on + strand at 758.993 kb on + strand at 758.993 kb on + strand at 758.993 kb on + strand at 758.993 kb on + strand at 758.994 kb on - strand at 759.031 kb on + strand at 759.032 kb on - strand at 759.207 kb on + strand, within Ga0059261_0727 at 759.207 kb on + strand, within Ga0059261_0727 at 759.207 kb on + strand, within Ga0059261_0727 at 759.207 kb on + strand, within Ga0059261_0727 at 759.207 kb on + strand at 759.208 kb on - strand, within Ga0059261_0727 at 759.208 kb on - strand, within Ga0059261_0727 at 759.229 kb on + strand, within Ga0059261_0727 at 759.230 kb on - strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 756,500 + Ga0059261_0723 0.35 -0.4 756,501 - Ga0059261_0723 0.35 +1.2 756,643 + Ga0059261_0723 0.72 +0.5 756,644 - Ga0059261_0723 0.72 -0.9 756,644 - Ga0059261_0723 0.72 +0.3 756,717 + -0.8 756,717 + -0.7 756,718 - -0.7 756,897 + +1.6 756,897 + -1.5 756,897 + -0.8 756,897 + +0.2 756,897 + +0.6 756,897 + -0.4 756,897 + +0.9 756,898 - +0.2 756,898 - -2.0 756,898 - +0.5 756,898 - -0.4 756,898 - +0.3 756,898 - -0.5 756,898 - -0.1 756,926 + +1.4 756,926 + +1.0 756,926 + -1.5 756,927 - +0.6 756,927 - -0.4 756,927 - -0.9 756,927 - +0.8 756,927 - -1.1 756,927 - -0.1 757,067 + Ga0059261_0724 0.33 +1.1 757,067 + Ga0059261_0724 0.33 +0.3 757,067 + Ga0059261_0724 0.33 +0.2 757,067 + Ga0059261_0724 0.33 +1.3 757,068 - Ga0059261_0724 0.33 -0.3 757,068 - Ga0059261_0724 0.33 +1.1 757,068 - Ga0059261_0724 0.33 -0.4 757,068 - Ga0059261_0724 0.33 -0.3 757,068 - Ga0059261_0724 0.33 +0.2 757,068 - Ga0059261_0724 0.33 -0.6 757,247 + Ga0059261_0724 0.73 -0.3 757,247 + Ga0059261_0724 0.73 -0.7 757,247 + Ga0059261_0724 0.73 -0.1 757,247 + Ga0059261_0724 0.73 +0.5 757,247 + Ga0059261_0724 0.73 +0.4 757,247 + Ga0059261_0724 0.73 -0.6 757,247 + Ga0059261_0724 0.73 +0.3 757,247 + +0.5 757,247 + Ga0059261_0724 0.73 +1.3 757,248 - Ga0059261_0724 0.73 -0.4 757,248 - Ga0059261_0724 0.73 -0.9 757,248 - Ga0059261_0724 0.73 -0.1 757,248 - Ga0059261_0724 0.73 -0.6 757,277 + Ga0059261_0724 0.79 +0.5 757,277 + Ga0059261_0724 0.79 +0.1 757,278 - Ga0059261_0724 0.80 +0.6 758,224 + Ga0059261_0725 0.87 -0.3 758,225 - Ga0059261_0725 0.87 -1.9 758,245 + -0.6 758,245 + Ga0059261_0725 0.89 -1.3 758,246 - Ga0059261_0725 0.89 -2.3 758,298 - -2.3 758,352 + -1.4 758,353 - -0.1 758,403 + +0.2 758,404 - -0.6 758,404 - -1.4 758,416 + +0.4 758,416 + +0.2 758,417 - +1.2 758,417 - -0.2 758,417 - -0.6 758,531 - -0.6 758,531 - -0.2 758,585 + +0.8 758,585 + -0.8 758,864 + Ga0059261_0726 0.71 +0.2 758,865 - Ga0059261_0726 0.72 +1.0 758,865 - Ga0059261_0726 0.72 +0.7 758,865 - Ga0059261_0726 0.72 +0.8 758,865 - Ga0059261_0726 0.72 -1.0 758,954 + +0.4 758,954 + -0.6 758,954 + -0.9 758,955 - +0.7 758,955 - -0.4 758,955 - +0.1 758,993 + -0.5 758,993 + +0.0 758,993 + +0.7 758,993 + -0.6 758,993 + -0.1 758,994 - -0.0 759,031 + +0.0 759,032 - -2.0 759,207 + Ga0059261_0727 0.36 -0.0 759,207 + Ga0059261_0727 0.36 +0.7 759,207 + Ga0059261_0727 0.36 +0.4 759,207 + Ga0059261_0727 0.36 -0.2 759,207 + +0.4 759,208 - Ga0059261_0727 0.36 -0.8 759,208 - Ga0059261_0727 0.36 +0.4 759,229 + Ga0059261_0727 0.39 -0.0 759,230 - Ga0059261_0727 0.39 -0.3 759,244 + Ga0059261_0727 0.41 -0.6 759,244 + Ga0059261_0727 0.41 -0.8 759,244 + Ga0059261_0727 0.41 -0.0 759,244 + Ga0059261_0727 0.41 -0.1 759,244 + Ga0059261_0727 0.41 -0.3 759,244 + Ga0059261_0727 0.41 -0.2 759,244 + Ga0059261_0727 0.41 -2.8 759,244 + Ga0059261_0727 0.41 -0.5 759,245 - Ga0059261_0727 0.41 -0.4 759,245 - Ga0059261_0727 0.41 +0.2 759,245 - Ga0059261_0727 0.41 -0.5 759,245 - Ga0059261_0727 0.41 +0.4 759,245 - Ga0059261_0727 0.41 -0.5 759,245 - Ga0059261_0727 0.41 +0.0 759,245 - Ga0059261_0727 0.41 -0.4 759,247 + Ga0059261_0727 0.42 -0.4 759,247 + Ga0059261_0727 0.42 +0.2 759,247 + Ga0059261_0727 0.42 -0.4 759,247 + Ga0059261_0727 0.42 -1.0 759,247 + Ga0059261_0727 0.42 +0.1 759,247 + Ga0059261_0727 0.42 -0.1 759,247 + Ga0059261_0727 0.42 -0.2 759,247 + Ga0059261_0727 0.42 +0.8 759,247 + Ga0059261_0727 0.42 -0.3 759,247 + Ga0059261_0727 0.42 -0.1 759,248 - Ga0059261_0727 0.42 -0.7 759,248 - Ga0059261_0727 0.42 -0.0 759,248 - Ga0059261_0727 0.42 -0.1 759,248 - Ga0059261_0727 0.42 -1.1 759,248 - Ga0059261_0727 0.42 -0.2 759,248 - Ga0059261_0727 0.42 -0.2 759,248 - Ga0059261_0727 0.42 -0.1 759,248 - Ga0059261_0727 0.42 +0.2 759,248 - Ga0059261_0727 0.42 +0.3
Or see this region's nucleotide sequence