Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0623 and Ga0059261_0624 overlap by 7 nucleotides Ga0059261_0624 and Ga0059261_0625 overlap by 1 nucleotides
Ga0059261_0623: Ga0059261_0623 - ABC-type Fe3+-siderophore transport system, permease component, at 663,374 to 664,369
_0623
Ga0059261_0624: Ga0059261_0624 - ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components, at 664,363 to 665,151
_0624
Ga0059261_0625: Ga0059261_0625 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21), at 665,151 to 666,164
_0625
Position (kb) 664
665
666 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 663.692 kb on + strand, within Ga0059261_0623 at 663.692 kb on + strand, within Ga0059261_0623 at 663.693 kb on - strand, within Ga0059261_0623 at 663.970 kb on + strand, within Ga0059261_0623 at 663.970 kb on + strand, within Ga0059261_0623 at 663.971 kb on - strand, within Ga0059261_0623 at 664.147 kb on + strand, within Ga0059261_0623 at 664.148 kb on - strand, within Ga0059261_0623 at 664.362 kb on + strand at 664.362 kb on + strand at 664.499 kb on + strand at 664.499 kb on + strand, within Ga0059261_0624 at 664.499 kb on + strand, within Ga0059261_0624 at 664.499 kb on + strand, within Ga0059261_0624 at 664.499 kb on + strand, within Ga0059261_0624 at 664.499 kb on + strand, within Ga0059261_0624 at 664.500 kb on - strand, within Ga0059261_0624 at 664.500 kb on - strand, within Ga0059261_0624 at 664.500 kb on - strand, within Ga0059261_0624 at 664.536 kb on + strand, within Ga0059261_0624 at 664.536 kb on + strand, within Ga0059261_0624 at 664.600 kb on + strand, within Ga0059261_0624 at 664.600 kb on + strand, within Ga0059261_0624 at 664.600 kb on + strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.972 kb on + strand, within Ga0059261_0624 at 664.973 kb on - strand, within Ga0059261_0624 at 665.065 kb on + strand, within Ga0059261_0624 at 665.065 kb on + strand, within Ga0059261_0624 at 665.066 kb on - strand, within Ga0059261_0624 at 665.066 kb on - strand, within Ga0059261_0624 at 665.066 kb on - strand, within Ga0059261_0624 at 665.066 kb on - strand, within Ga0059261_0624 at 665.145 kb on + strand at 665.146 kb on - strand at 665.146 kb on - strand at 665.146 kb on - strand at 665.146 kb on - strand at 665.146 kb on - strand at 665.648 kb on + strand, within Ga0059261_0625 at 665.648 kb on + strand, within Ga0059261_0625 at 665.648 kb on + strand, within Ga0059261_0625 at 665.648 kb on + strand, within Ga0059261_0625 at 665.648 kb on + strand, within Ga0059261_0625 at 665.649 kb on - strand, within Ga0059261_0625 at 665.649 kb on - strand, within Ga0059261_0625 at 665.738 kb on + strand, within Ga0059261_0625
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 663,692 + Ga0059261_0623 0.32 +1.1 663,692 + Ga0059261_0623 0.32 -0.1 663,693 - Ga0059261_0623 0.32 -1.0 663,970 + Ga0059261_0623 0.60 -0.7 663,970 + Ga0059261_0623 0.60 -1.4 663,971 - Ga0059261_0623 0.60 -1.0 664,147 + Ga0059261_0623 0.78 -1.1 664,148 - Ga0059261_0623 0.78 -1.0 664,362 + -1.3 664,362 + -1.0 664,499 + -0.6 664,499 + Ga0059261_0624 0.17 -0.6 664,499 + Ga0059261_0624 0.17 -0.6 664,499 + Ga0059261_0624 0.17 -0.9 664,499 + Ga0059261_0624 0.17 -0.0 664,499 + Ga0059261_0624 0.17 -0.3 664,500 - Ga0059261_0624 0.17 -0.6 664,500 - Ga0059261_0624 0.17 -0.9 664,500 - Ga0059261_0624 0.17 -0.5 664,536 + Ga0059261_0624 0.22 -0.6 664,536 + Ga0059261_0624 0.22 +0.4 664,600 + Ga0059261_0624 0.30 -0.4 664,600 + Ga0059261_0624 0.30 -0.6 664,600 + Ga0059261_0624 0.30 -2.1 664,601 - Ga0059261_0624 0.30 -1.1 664,601 - Ga0059261_0624 0.30 -0.9 664,601 - Ga0059261_0624 0.30 -1.0 664,601 - Ga0059261_0624 0.30 -1.3 664,601 - Ga0059261_0624 0.30 -0.8 664,601 - Ga0059261_0624 0.30 -1.9 664,972 + Ga0059261_0624 0.77 -2.1 664,973 - Ga0059261_0624 0.77 -1.1 665,065 + Ga0059261_0624 0.89 +0.1 665,065 + Ga0059261_0624 0.89 -3.6 665,066 - Ga0059261_0624 0.89 -0.1 665,066 - Ga0059261_0624 0.89 -1.3 665,066 - Ga0059261_0624 0.89 -0.3 665,066 - Ga0059261_0624 0.89 -1.8 665,145 + +0.7 665,146 - -0.8 665,146 - +0.6 665,146 - -1.0 665,146 - -0.4 665,146 - +0.2 665,648 + Ga0059261_0625 0.49 +0.7 665,648 + Ga0059261_0625 0.49 -0.7 665,648 + Ga0059261_0625 0.49 -1.5 665,648 + Ga0059261_0625 0.49 -0.5 665,648 + Ga0059261_0625 0.49 +0.1 665,649 - Ga0059261_0625 0.49 +0.2 665,649 - Ga0059261_0625 0.49 -0.5 665,738 + Ga0059261_0625 0.58 -0.0
Or see this region's nucleotide sequence