Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03953

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
1,657,894	+		CCNA_01546	0.69	+1.9
1,657,902	-		CCNA_01546	0.70	+0.1
1,657,978	-		CCNA_01546	0.73	+0.7
1,657,978	-		CCNA_01546	0.73	+2.1
1,657,985	+		CCNA_01546	0.73	-0.9
1,657,985	+		CCNA_01546	0.73	+1.6
1,657,985	+		CCNA_01546	0.73	+0.6
1,658,021	+		CCNA_01546	0.75	-0.1
1,658,021	+		CCNA_01546	0.75	-0.6
1,658,021	+		CCNA_01546	0.75	-1.4
1,658,029	-		CCNA_01546	0.75	+0.9
1,658,031	+		CCNA_01546	0.75	-0.9
1,658,044	-		CCNA_01546	0.76	+0.1
1,658,069	+		CCNA_01546	0.77	-0.1
1,658,077	-		CCNA_01546	0.77	+0.8
1,658,079	-		CCNA_01546	0.78	+0.8
1,658,098	-		CCNA_01546	0.78	+1.1
1,658,143	-		CCNA_01546	0.80	+0.6
1,658,145	+		CCNA_01546	0.81	+1.4
1,658,145	+		CCNA_01546	0.81	-0.1
1,658,145	+		CCNA_01546	0.81	-0.9
1,658,210	+		CCNA_01546	0.83	+0.0
1,658,210	+		CCNA_01546	0.83	+0.6
1,658,218	-		CCNA_01546	0.84	+0.4
1,658,235	-		CCNA_01546	0.85	+0.1
1,658,260	+		CCNA_01546	0.86	+0.1
1,658,273	+		CCNA_01546	0.86	+0.4
1,658,273	+		CCNA_01546	0.86	+0.2
1,658,273	+		CCNA_01546	0.86	-0.2
1,658,281	-		CCNA_01546	0.87	-0.3
1,658,281	-		CCNA_01546	0.87	+0.2
1,658,281	-		CCNA_01546	0.87	+1.9
1,658,285	+		CCNA_01546	0.87	-1.6
1,658,285	+		CCNA_01546	0.87	+0.4
1,658,285	+		CCNA_01546	0.87	-0.1
1,658,293	-		CCNA_01546	0.87	+0.8
1,658,293	-		CCNA_01546	0.87	+0.2
1,658,293	-		CCNA_01546	0.87	+1.7
1,658,301	+		CCNA_01546	0.88	+0.4
1,658,344	+		CCNA_01546	0.89	-0.8
1,658,441	-				+2.5
1,658,458	-				+0.3
1,658,498	-				+1.0
1,658,510	-				+0.3
1,658,519	+				+1.6
1,658,519	+				-0.4
1,658,519	+				+0.8
1,658,519	+				+0.8
1,658,519	+				-0.4
1,658,519	+				+1.6
1,658,519	+				-0.8
1,658,524	+				+1.1
1,658,524	+				-1.1
1,658,527	-				+1.5
1,658,527	-				-0.9
1,658,527	-				-0.1
1,658,527	-				-1.2
1,658,527	-				-1.0
1,658,527	-				+0.0
1,658,527	-				+0.5
1,658,527	-				+0.7
1,658,532	-				+0.2
1,658,567	-				+1.4
1,658,590	-				+0.6
1,658,595	-				+2.2
1,658,610	-				+0.0
1,658,619	+				+0.8
1,658,645	-				-1.3
1,658,654	+				-1.1
1,658,675	-				+0.2
1,658,787	+				-0.0
1,658,789	+				+1.1
1,658,795	-				+0.1
1,658,810	-				-0.5
1,658,817	+				+0.4
1,658,820	-				+1.2
1,658,827	+				+1.6
1,658,831	-				+2.4
1,658,847	+				+0.6
1,658,855	-				+0.2
1,658,881	+				+0.9
1,658,908	+		CCNA_03953	0.14	+1.1
1,658,957	-		CCNA_03953	0.26	-0.1
1,658,967	-		CCNA_03953	0.28	-1.1
1,658,970	+		CCNA_03953	0.29	+0.9
1,658,970	+		CCNA_03953	0.29	+0.8
1,658,978	-		CCNA_03953	0.31	-0.6
1,658,995	+		CCNA_03953	0.35	+1.1
1,658,995	+		CCNA_03953	0.35	-0.9
1,659,062	-		CCNA_03953	0.51	+1.0
1,659,069	+		CCNA_03953	0.53	-1.3
1,659,077	-		CCNA_03953	0.55	+0.9
1,659,077	-		CCNA_03953	0.55	-2.0
1,659,105	+		CCNA_03953	0.62	-1.0
1,659,118	+		CCNA_03953	0.65	-0.1
1,659,138	+		CCNA_03953	0.70	+0.8
1,659,152	+		CCNA_03953	0.73	+0.9
1,659,153	+		CCNA_03953	0.73	+0.6
1,659,153	+		CCNA_03953	0.73	+2.9
1,659,160	-		CCNA_03953	0.75	-0.6
1,659,175	+		CCNA_03953	0.79	+0.4
1,659,180	+		CCNA_03953	0.80	+0.3
1,659,185	+		CCNA_03953	0.81	-2.0
1,659,188	-		CCNA_03953	0.82	+1.9
1,659,205	-		CCNA_03953	0.86	-0.2
1,659,210	+		CCNA_03953	0.87	+0.1
1,659,210	+		CCNA_03953	0.87	+0.2
1,659,218	-		CCNA_03953	0.89	-1.5
1,659,233	+				-1.0
1,659,393	+				-1.0
1,659,393	+				-1.3