Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03805

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
3,969,263	-		CCNA_03803	0.47	+0.8
3,969,277	+		CCNA_03803	0.48	-0.1
3,969,378	+		CCNA_03803	0.57	-0.3
3,969,378	+		CCNA_03803	0.57	-0.5
3,969,378	+				+3.6
3,969,378	+		CCNA_03803	0.57	-0.8
3,969,378	+		CCNA_03803	0.57	-1.0
3,969,378	+		CCNA_03803	0.57	+0.4
3,969,386	-		CCNA_03803	0.58	-1.8
3,969,386	-		CCNA_03803	0.58	-1.5
3,969,386	-		CCNA_03803	0.58	+1.6
3,969,402	+		CCNA_03803	0.59	-0.8
3,969,450	+		CCNA_03803	0.64	-1.3
3,969,450	+		CCNA_03803	0.64	-0.8
3,969,450	+		CCNA_03803	0.64	-0.6
3,969,458	-		CCNA_03803	0.64	-1.6
3,969,458	-		CCNA_03803	0.64	+0.8
3,969,458	-		CCNA_03803	0.64	+0.2
3,969,491	+		CCNA_03803	0.67	-1.8
3,969,517	+		CCNA_03803	0.70	-0.2
3,969,517	+		CCNA_03803	0.70	+0.9
3,969,517	+		CCNA_03803	0.70	-0.5
3,969,517	+		CCNA_03803	0.70	+0.6
3,969,525	-		CCNA_03803	0.71	+0.9
3,969,558	-		CCNA_03803	0.74	-1.4
3,969,579	+		CCNA_03803	0.76	+0.1
3,969,579	+		CCNA_03803	0.76	+0.3
3,969,579	+		CCNA_03803	0.76	-1.5
3,969,597	-		CCNA_03803	0.77	-1.2
3,969,607	-		CCNA_03803	0.78	-0.9
3,969,613	+		CCNA_03803	0.79	+0.6
3,969,666	+		CCNA_03803	0.84	+0.0
3,969,673	+		CCNA_03803	0.84	+1.3
3,969,688	+		CCNA_03803	0.86	+0.1
3,969,688	+		CCNA_03803	0.86	+0.3
3,969,747	-				+0.8
3,969,747	-				+0.3
3,969,772	-				-1.1
3,969,774	+				-2.0
3,969,791	-				-0.2
3,969,793	+				+0.5
3,969,803	-				-1.0
3,969,837	+				+0.3
3,969,837	+				-0.1
3,969,845	-				+1.2
3,969,845	-				+1.5
3,969,906	+				+0.2
3,970,009	+		CCNA_03804	0.16	+1.0
3,970,009	+		CCNA_03804	0.16	+0.6
3,970,032	+		CCNA_03804	0.23	+0.4
3,970,042	+		CCNA_03804	0.26	-0.8
3,970,085	-				+2.0
3,970,085	-		CCNA_03804	0.39	+0.4
3,970,085	-		CCNA_03804	0.39	+0.7
3,970,085	-		CCNA_03804	0.39	-1.4
3,970,085	-		CCNA_03804	0.39	-0.6
3,970,121	-		CCNA_03804	0.50	-2.6
3,970,166	-		CCNA_03804	0.63	+0.6
3,970,167	+		CCNA_03804	0.64	-1.4
3,970,172	+		CCNA_03804	0.65	+0.5
3,970,172	+		CCNA_03804	0.65	+0.8
3,970,172	+		CCNA_03804	0.65	+0.0
3,970,180	-		CCNA_03804	0.68	-0.1
3,970,180	-		CCNA_03804	0.68	-0.5
3,970,180	-		CCNA_03804	0.68	+1.0
3,970,191	+		CCNA_03804	0.71	+0.5
3,970,208	+		CCNA_03804	0.76	+0.5
3,970,254	+				-0.8
3,970,254	+				-0.0
3,970,254	+				-0.5
3,970,294	-				+3.2
3,970,321	-		CCNA_03805	0.11	+4.9
3,970,328	-		CCNA_03805	0.12	+3.5
3,970,328	-		CCNA_03805	0.12	+3.1
3,970,367	-		CCNA_03805	0.19	+3.2
3,970,367	-		CCNA_03805	0.19	+4.0
3,970,369	-		CCNA_03805	0.20	+4.2
3,970,388	-		CCNA_03805	0.23	+3.2
3,970,417	-		CCNA_03805	0.28	+3.1
3,970,417	-		CCNA_03805	0.28	+3.0
3,970,417	-		CCNA_03805	0.28	+2.9
3,970,439	-		CCNA_03805	0.32	+2.9
3,970,441	-		CCNA_03805	0.32	+2.6
3,970,464	-		CCNA_03805	0.36	+3.1
3,970,483	-		CCNA_03805	0.39	+5.2
3,970,505	-		CCNA_03805	0.43	+5.3
3,970,505	-		CCNA_03805	0.43	+4.4
3,970,544	-		CCNA_03805	0.50	+4.4
3,970,544	-		CCNA_03805	0.50	+3.2
3,970,567	-		CCNA_03805	0.54	+5.3
3,970,572	-		CCNA_03805	0.55	+3.1
3,970,572	-		CCNA_03805	0.55	+4.9
3,970,631	-		CCNA_03805	0.65	+3.5
3,970,690	-		CCNA_03805	0.75	+3.3
3,970,690	-		CCNA_03805	0.75	+2.9
3,970,737	+		CCNA_03805	0.83	-0.8
3,970,745	-		CCNA_03805	0.84	-0.4
3,970,947	+				-1.2
3,970,989	+				-0.6
3,970,989	-				-1.5
3,970,990	+				-0.1
3,971,019	+				-0.4
3,971,044	-				+0.5
3,971,080	+				-0.0
3,971,085	+				+0.0
3,971,104	+				+0.7
3,971,104	+				-0.0
3,971,104	+				+1.5
3,971,211	-				+0.2
3,971,280	-		CCNA_03806	0.16	-1.3
3,971,288	+		CCNA_03806	0.17	+1.9
3,971,304	-		CCNA_03806	0.19	-0.5
3,971,366	+		CCNA_03806	0.26	+1.9
3,971,366	+		CCNA_03806	0.26	+2.0
3,971,366	+		CCNA_03806	0.26	+2.8
3,971,366	+		CCNA_03806	0.26	+1.7
3,971,366	+		CCNA_03806	0.26	+1.7
3,971,366	+		CCNA_03806	0.26	+1.7
3,971,366	+		CCNA_03806	0.26	+1.9
3,971,374	-		CCNA_03806	0.27	+0.6
3,971,374	-		CCNA_03806	0.27	+0.2
3,971,374	-		CCNA_03806	0.27	-0.5
3,971,374	-		CCNA_03806	0.27	+0.7
3,971,374	-		CCNA_03806	0.27	+0.7
3,971,374	-		CCNA_03806	0.27	+1.0
3,971,374	-		CCNA_03806	0.27	-0.6
3,971,374	-		CCNA_03806	0.27	+0.5
3,971,374	-		CCNA_03806	0.27	+0.4
3,971,379	-		CCNA_03806	0.28	+0.0
3,971,379	-		CCNA_03806	0.28	+0.5
3,971,379	-		CCNA_03806	0.28	+1.4
3,971,404	-		CCNA_03806	0.31	+0.3
3,971,409	-		CCNA_03806	0.31	+0.5
3,971,495	+		CCNA_03806	0.41	+1.7
3,971,503	-		CCNA_03806	0.42	+1.1
3,971,542	+		CCNA_03806	0.47	+1.8
3,971,555	-		CCNA_03806	0.48	+0.8
3,971,575	-		CCNA_03806	0.51	+0.1
3,971,585	+		CCNA_03806	0.52	+1.4
3,971,627	+		CCNA_03806	0.57	+1.6
3,971,657	+		CCNA_03806	0.60	+1.7
3,971,657	+		CCNA_03806	0.60	+1.8
3,971,657	+		CCNA_03806	0.60	+2.1
3,971,658	-		CCNA_03806	0.60	+0.7
3,971,672	+		CCNA_03806	0.62	+1.9
3,971,677	+		CCNA_03806	0.63	+2.1
3,971,685	+		CCNA_03806	0.64	+1.6
3,971,685	+		CCNA_03806	0.64	+0.4
3,971,693	-		CCNA_03806	0.64	-0.5
3,971,693	-		CCNA_03806	0.64	-1.2
3,971,787	-		CCNA_03806	0.75	+1.0
3,971,790	+		CCNA_03806	0.76	+2.2